RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 ANPEPP15144 967 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 NQO1P15559 274 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 TNFRSF1BP20333 461 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 CRATP43155 626 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 DSTNP60981 165 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ABCE1P61221 599 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 CX3CL1P78423 397 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 MRPS11P82912 194 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 GLO1Q04760 184 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 MS4A18Q3C1V0 323 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 PHLDA2Q53GA4 152 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 COLCA1Q6ZS62 124 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZNF584Q8IVC4 421 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 SKA3Q8IX90 412 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 CCDC36Q8IYA8 594 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 SIGLECL1Q8N7X8 197 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 OR6N1Q8NGY5 312 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 FGFBP3Q8TAT2 258 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 NANPQ8TBE9 248 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 GTF3AQ92664 365 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 TAF15Q92804 592 aaKnown RBP eCLIP4.53□□□□□ -1.688e-9■□□□□ 10.8
HNRNPC-233ENST00000557768 TMEM19Q96HH6 336 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZIM3Q96PE6 472 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 RBM38Q9H0Z9 239 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZNF385DQ9H6B1 395 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZNF696Q9H7X3 374 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 Q9H8V8 135 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 SLC52A3Q9NQ40 469 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 DDX28Q9NUL7 540 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 AIG1Q9NVV5 245 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 MED29Q9NX70 200 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 TAAR3PQ9P1P4 343 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 RPS6KB2Q9UBS0 482 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 OPN4Q9UHM6 478 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 LGALS13Q9UHV8 139 aa4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 ZNF346Q9UL40 294 aaKnown RBP4.53□□□□□ -1.68
HNRNPC-233ENST00000557768 TRAV36DV7A0A075B6V5 113 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 A0A087WUJ7 227 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 IGHV1-69-2A0A0G2JMI3 117 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 A0A0G2JPF8 293 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 LOC102725191A0A1B0GVB3 256 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 A0A1B0GWA3 101 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ZNF726A6NNF4 738 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 HNRNPCL2B2RXH8 293 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 HNRNPCL3B7ZW38 293 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 LRRN3E7EW58 273 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 H3BNX3 289 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 J3QLI3 93 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 RFXANKO14593 260 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 OR2T1O43869 369 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 TYROBPO43914 113 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 UBL3O95164 117 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ANP32DO95626 131 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 IGHV2-5P01817 119 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SERPINE1P05121 402 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SERPINA5P05154 406 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 HNRNPCL4P0DMR1 293 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 AREGP15514 252 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 HTR2AP28223 471 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 CRYBB2P43320 205 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 OR3A1P47881 315 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SLC1A6P48664 564 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 RPL14P50914 215 aaKnown RBP4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 CRISP3P54108 245 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ERVS71-1P61550 626 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 RPS23P62266 143 aaKnown RBP4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 LCN2P80188 198 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SLC34A1Q06495 639 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 IFFO1Q0D2I5 559 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ZP4Q12836 540 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 GTDC1Q4AE62 458 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 C6orf89Q6UWU4 347 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 WDR88Q6ZMY6 472 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 COMTD1Q86VU5 262 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 TEX29Q8N6K0 151 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SLC30A7Q8NEW0 376 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SYNPRQ8TBG9 265 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SLC38A4Q969I6 547 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 MAL2Q969L2 176 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 RAB39BQ96DA2 213 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 NSMCE2Q96MF7 247 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SORT1Q99523 831 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ZBTB18Q99592 522 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SH3GL3Q99963 347 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 NEURL2Q9BR09 285 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 WACQ9BTA9 647 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 RSPO3Q9BXY4 272 aaPredicted RBP4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ULBP2Q9BZM5 246 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 ARMC7Q9H6L4 198 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 WDR55Q9H6Y2 383 aaPredicted RBP4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 MEAF6Q9HAF1 191 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 CACYBPQ9HB71 228 aaKnown RBP4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 B3GAT2Q9NPZ5 323 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 CALML5Q9NZT1 146 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 SLC7A8Q9UHI5 535 aa4.52□□□□□ -1.69
HNRNPC-233ENST00000557768 DAPK2Q9UIK4 370 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms