RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ZNF638Q14966 1978 aaKnown RBP0.13□□□□□ -2.39
FOXN3-216ENST00000557496 KIAA2026Q5HYC2 2103 aa0.13□□□□□ -2.39
FOXN3-216ENST00000557496 MYOFQ9NZM1 2061 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 PCDH15Q96QU1 1955 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CCL15-CCL14A0A0B4J2E2 113 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 A0A1B0GU33 70 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 OR2AG2A6NM03 316 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CXCL11O14625 94 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 EIF3HO15372 352 aaKnown RBP eCLIP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 FLOT1O75955 427 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 GUCA1CO95843 209 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CST1P01037 141 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 SERPINE2P07093 398 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 TROVE2P10155 538 aaKnown RBP eCLIP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 GABRG2P18507 467 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 AIF1P55008 147 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 PLP1P60201 277 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 SEMG2Q02383 582 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 FOXF1Q12946 379 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 IL24Q13007 206 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CHIT1Q13231 466 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ART3Q13508 389 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CCL15Q16663 113 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 MAJINQ3KP22 176 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ALKBH6Q3KRA9 238 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 GCSAMLQ5JQS6 135 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 TMPRSS11AQ6ZMR5 421 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 Q6ZSR6 202 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 RPRMLQ8N4K4 120 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 OR5AR1Q8NGP9 310 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 NUBPLQ8TB37 319 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 DCAKDQ8WVC6 231 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 KIFAP3Q92845 792 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CDS1Q92903 461 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 NT5C3BQ969T7 300 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 SYAP1Q96A49 352 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 RERGQ96A58 199 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 TUBGCP3Q96CW5 907 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 BTN2A3PQ96KV6 586 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 C16orf45Q96MC5 204 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 SLC29A1Q99808 456 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 HSPB9Q9BQS6 159 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 RACGAP1Q9H0H5 632 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ANKRA2Q9H9E1 313 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 BEX1Q9HBH7 125 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 SND1-IT1Q9HBX3 110 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 RBFOX1Q9NWB1 397 aaKnown RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 HRASLS2Q9NWW9 162 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 HPF1Q9NWY4 346 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 CES1P1Q9UKY3 287 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ZNF443Q9Y2A4 671 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 AMMECR1Q9Y4X0 333 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 AP1M2Q9Y6Q5 423 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 DDX49Q9Y6V7 483 aaKnown RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 DLG5Q8TDM6 1919 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 BAZ2BQ9UIF8 2168 aaKnown RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 NCOA6Q14686 2063 aaPredicted RBP0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ROS1P08922 2347 aa0.12□□□□□ -2.39
FOXN3-216ENST00000557496 ADAMTS7Q9UKP4 1686 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 MICAL3Q7RTP6 2002 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 A6NDN8 102 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 GABRPO00591 440 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 RAB29O14966 203 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CDH16O75309 829 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 MTX2O75431 263 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 FGFR1OPO95684 399 aaKnown RBP0.11□□□□□ -2.39
FOXN3-216ENST00000557496 SERPINA3P01011 423 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 ANXA5P08758 320 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 PGA4P0DJD7 388 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 PGA3P0DJD8 388 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CSNK2A2P19784 350 aaPredicted RBP0.11□□□□□ -2.39
FOXN3-216ENST00000557496 GLRA2P23416 452 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 OR1E1P30953 314 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 COILP38432 576 aaPredicted RBP0.11□□□□□ -2.39
FOXN3-216ENST00000557496 NBL1P41271 181 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 MAGEA6P43360 314 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 IFNAR2P48551 515 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 HNMTP50135 292 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 PPP1CAP62136 330 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 SELENBP1Q13228 472 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 GPM6BQ13491 265 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 NAB1Q13506 487 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CTSL3PQ5NE16 218 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 PMF1Q6P1K2 205 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 C12orf54Q6X4T0 127 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CERS6Q6ZMG9 384 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CDH26Q8IXH8 852 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CPNE9Q8IYJ1 553 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 ZCCHC7Q8N3Z6 543 aaKnown RBP0.11□□□□□ -2.39
FOXN3-216ENST00000557496 SNX31Q8N9S9 440 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 Q8NAQ8 132 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 UBAC2Q8NBM4 344 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 OR4M2Q8NGB6 313 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 OR10D4PQ8NGN7 298 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 OR4K13Q8NH42 304 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 KCNG3Q8TAE7 436 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 ITLN2Q8WWU7 325 aaPredicted RBP0.11□□□□□ -2.39
FOXN3-216ENST00000557496 CACNG8Q8WXS5 425 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 TNFRSF14Q92956 283 aa0.11□□□□□ -2.39
FOXN3-216ENST00000557496 RAD51AP1Q96B01 352 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms