RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 GABARAPL1Q9H0R8 117 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 H3BVH4 76 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 HLA-HP01893 362 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 SDC1P18827 310 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 MRPS6P82932 125 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF74Q16587 644 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 MRPL21Q7Z2W9 205 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 RNF133Q8WVZ7 376 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM106AQ96A25 262 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC25A37Q9NYZ2 338 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 PPIL1Q9Y3C6 166 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ABCA8O94911 1581 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF860A6NHJ4 632 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 B9A039 149 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 G3V3Y1 287 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CORTO00230 105 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 P2RX6O15547 441 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CTSLP07711 333 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 TEAD1P28347 426 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 DHRS2Q13268 280 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 PLXDC2Q6UX71 529 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 MDGA2Q7Z553 956 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 GID4Q8IVV7 300 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 OR4F5Q8NH21 305 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 OR4F4Q96R69 305 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF587Q96SQ5 575 aaPredicted RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 IL26Q9NPH9 171 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 A0A0U1RQV5 110 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 HELTA6NFD8 242 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 TRDCB7Z8K6 153 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CT45A8P0DMV1 189 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CT45A9P0DMV2 189 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 RAB35Q15286 201 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CT45A2Q5DJT8 189 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 FBXW9Q5XUX1 488 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC35F2Q8IXU6 374 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CMTM8Q8IZV2 173 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CACNG8Q8WXS5 425 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 WDR13Q9H1Z4 485 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 GCM1Q9NP62 436 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 MED29Q9NX70 200 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 TRAV30A0A087WSZ9 112 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ALOX12BO75342 701 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ABHD16AO95870 558 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 HPNP05981 417 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CLDN2P57739 230 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ARF6P62330 175 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 RNFT1Q5M7Z0 435 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 HEPN1Q6WQI6 88 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 ASCL4Q6XD76 172 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM99Q8N816 258 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 LINC00615Q96LM1 132 aaPredicted RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 LOC105371242A0A075B767 164 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 GABRDO14764 452 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CLDN7O95471 211 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 MPIG6BO95866 241 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 SBK3P0C264 359 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 PPIAL4GP0DN37 164 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 METTL7BQ6UX53 244 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 C16orf82Q7Z2V1 217 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 OR10S1Q8NGN2 331 aa8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 UBE2J1Q9Y385 318 aaPredicted RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 CHD3Q12873 2000 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-203ENST00000553612 FEZF1A0PJY2 475 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 SRPX2O60687 465 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TFPIP10646 304 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 RBPJQ06330 500 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PDGFRLQ15198 375 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF841Q6ZN19 808 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 Q6ZSR9 355 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC35E3Q7Z769 313 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 BATF2Q8N1L9 274 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM140Q9NV12 185 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TET3O43151 1660 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 H3BUT2 72 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC16A7O60669 478 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 HOXC6P09630 235 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF823P16415 610 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ATF1P18846 271 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ATP5J2P56134 94 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TAS2R31P59538 309 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 RELBQ01201 579 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 GGTA1PQ4G0N0 100 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 CTXN3Q4LDR2 81 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF322Q6U7Q0 402 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms