RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CST11Q9H112 138 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 FN3KRPQ9HA64 309 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 CCDC187A0A096LP49 1063 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 TRAV14DV4A0A0A6YYC5 116 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF716A6NP11 495 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 F10P00742 488 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 THBS4P35443 961 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 ZMYND11Q15326 602 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 SNAI3Q3KNW1 292 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 NHLRC3Q5JS37 347 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 WIPI1Q5MNZ9 446 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 CLVS2Q5SYC1 327 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 NAXDQ8IW45 347 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 ZDHHC22Q8N966 263 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 ASB13Q8WXK3 278 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 ARHGAP5-AS1Q96IT6 56 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 GSX2Q9BZM3 304 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 P4HTMQ9NXG6 502 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 KCNN3Q9UGI6 736 aa16.24■□□□□ 0.19
PRPF40B-208ENST00000548436 PINLYPA6NC86 204 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 CXCL13O43927 109 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF883P0CG24 379 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 POU3F2P20265 443 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 CD34P28906 385 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 PTGFRP43088 359 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 PPP1R1AQ13522 171 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 Q6ZSR3 168 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 OR4K15Q8NH41 348 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 PSMF1Q92530 271 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 CRLF2Q9HC73 371 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 ANAPC10Q9UM13 185 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 PIGLQ9Y2B2 252 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 NOP16Q9Y3C1 178 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 STMND1H3BQB6 276 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 UBBP0CG47 229 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 CLDN15P56746 228 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 LYG2Q86SG7 212 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 ADAD2Q8NCV1 583 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 OR56B1Q8NGI3 324 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 OR5M8Q8NGP6 311 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 ADGRG7Q96K78 797 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 SPRY4Q9C004 299 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 CHST5Q9GZS9 411 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 ARL6Q9H0F7 186 aa16.23■□□□□ 0.19
PRPF40B-208ENST00000548436 RFPL4AA6NLU0 287 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 RFPL4AL1F8VTS6 287 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 MFNGO00587 321 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 SERPINA7P05543 415 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 NAT2P11245 290 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 NAT1P18440 290 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 TBPP20226 339 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 GMFBP60983 142 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 RAB14P61106 215 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 EIF3IQ13347 325 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 MICBQ29980 383 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 COMMD7Q86VX2 200 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 FAM89BQ8N5H3 189 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 PNLDC1Q8NA58 520 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 SGK3Q96BR1 496 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 TAAR9Q96RI9 348 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 URM1Q9BTM9 101 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 OR10A2Q9H208 303 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 PCDHGA1Q9Y5H4 931 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 C9orf170A2RU37 121 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 C9orf172C9J069 976 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 CCSO14618 274 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 IL2RAP01589 272 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 IFNA6P05013 189 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 CRYGSP22914 178 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 ALDH3B1P43353 468 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 CYB561P49447 251 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 TOR2AQ5JU69 321 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 LIN54Q6MZP7 749 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 GPR137CQ8N3F9 429 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 OR10K1Q8NGX5 313 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 OR10D3Q8NH80 312 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 PP6455Q8WZ26 134 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 STRADBQ9C0K7 418 aa16.22■□□□□ 0.19
PRPF40B-208ENST00000548436 LNP1A1A4G5 178 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 SYNGR3O43761 229 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 RP2O75695 350 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 CD8AP01732 235 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 FCGR2AP12318 317 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 HGFACQ04756 655 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 PNLIPRP3Q17RR3 467 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 ZBTB44Q8NCP5 570 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 OR51T1Q8NGJ9 327 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 OR2V1Q8NHB1 315 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 ANGPTL6Q8NI99 470 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 ST8SIA4Q92187 359 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 PIGTQ969N2 578 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 ALKBH3Q96Q83 286 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 ZPBPQ9BS86 351 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 RYDENQ9NUL5 291 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 TMEM38BQ9NVV0 291 aa16.21■□□□□ 0.19
PRPF40B-208ENST00000548436 FOXI3A8MTJ6 420 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms