RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TFAP2EQ6VUC0 442 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 TMPPEQ6ZT21 453 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 FAM89BQ8N5H3 189 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 STOML3Q8TAV4 291 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 C1orf147Q96MC9 270 aaPredicted RBP20.52■□□□□ 0.88
FOXA1-202ENST00000545425 GAREM1Q9H706 876 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 IGHV5-10-1A0A0J9YXX1 117 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 RNF222A6NCQ9 220 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 SCO1O75880 301 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 QDPRP09417 244 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 CEACAM1P13688 526 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 SURF2Q15527 256 aaPredicted RBP20.51■□□□□ 0.87
FOXA1-202ENST00000545425 COMMD2Q86X83 199 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 PP6455Q8WZ26 134 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 ARPC5LQ9BPX5 153 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 RAB18Q9NP72 206 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 ASH2LQ9UBL3 628 aa20.51■□□□□ 0.87
FOXA1-202ENST00000545425 CNOT1A5YKK6 2376 aaKnown RBP20.51■□□□□ 0.87
FOXA1-202ENST00000545425 TEX46H3BTG2 121 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 SULT2B1O00204 365 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 CSN2P05814 226 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 HCKP08631 526 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 FPR2P25090 351 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 PSMB6P28072 239 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 NOVA1P51513 510 aaKnown RBP20.5■□□□□ 0.87
FOXA1-202ENST00000545425 IL11RAQ14626 422 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 EXT1Q16394 746 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 PLEKHN1Q494U1 663 aaPredicted RBP20.5■□□□□ 0.87
FOXA1-202ENST00000545425 PAN3Q58A45 887 aaKnown RBP20.5■□□□□ 0.87
FOXA1-202ENST00000545425 GVQW1Q8N7I0 195 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF283Q8N7M2 679 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 GJC3Q8NFK1 279 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 OR10K1Q8NGX5 313 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 OR14K1Q8NGZ2 314 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 ST8SIA4Q92187 359 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 CMBLQ96DG6 245 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 TMEM41AQ96HV5 264 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 NAA11Q9BSU3 229 aaPredicted RBP20.5■□□□□ 0.87
FOXA1-202ENST00000545425 PIGMQ9H3S5 423 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 ATXN7L1Q9ULK2 861 aaPredicted RBP20.5■□□□□ 0.87
FOXA1-202ENST00000545425 ALPK2Q86TB3 2170 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 UNC13CQ8NB66 2214 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 CACNA1EQ15878 2313 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 OR2AT4A6NND4 320 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 MFNGO00587 321 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 TIAF1O95411 115 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 CRHP06850 196 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 FGF5P12034 268 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 MSR1P21757 451 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 HLA-BQ31612 363 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 OR2I1PQ8NGU4 316 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 GPR132Q9UNW8 380 aa20.5■□□□□ 0.87
FOXA1-202ENST00000545425 SPTBN2O15020 2390 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 NCOR2Q9Y618 2525 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 SHISA8B8ZZ34 492 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 MPIG6BO95866 241 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF883P0CG24 379 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 MYF5P13349 255 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 CCL7P80098 99 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 OR52W1Q6IF63 320 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 PIP4P1Q86T03 277 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 PEG10Q86TG7 708 aaKnown RBP20.49■□□□□ 0.87
FOXA1-202ENST00000545425 TMEM54Q969K7 222 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 OR10A2Q9H208 303 aa20.49■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF230Q9UIE0 474 aaPredicted RBP20.49■□□□□ 0.87
FOXA1-202ENST00000545425 RAB19A4D1S5 217 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 SERPINE3A8MV23 424 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 DNPH1O43598 174 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CNR1P21554 472 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 H3F3AP84243 136 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 SNTB1Q13884 538 aaKnown RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 INPP5JQ15735 1006 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 GUSBP11Q6P575 273 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 C17orf107Q6ZR85 190 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 WDSUB1Q8N9V3 476 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 OR5H2Q8NGV7 314 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CCDC74BQ96LY2 380 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF471Q9BX82 626 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 NELFAQ9H3P2 528 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CHMP1AQ9HD42 196 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 HRH3Q9Y5N1 445 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CHCHD2Q9Y6H1 151 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 A0A1W2PQM1 296 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 DHRS7CA6NNS2 312 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 POM121CA8CG34 1229 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 F8VVB4 439 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 F8VWA3 439 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 SFT2D2O95562 160 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CD59P13987 128 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 VAMP1P23763 118 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CSNK1A1P48729 337 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 ATP1B3P54709 279 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 HIST1H3AP68431 136 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 TMEM176BQ3YBM2 270 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 HIST2H3PS2Q5TEC6 136 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 HIST2H3AQ71DI3 136 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 RHBDD1Q8TEB9 315 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 CPNE2Q96FN4 548 aaPredicted RBP20.48■□□□□ 0.87
FOXA1-202ENST00000545425 GPER1Q99527 375 aa20.48■□□□□ 0.87
FOXA1-202ENST00000545425 V9GYS6 101 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms