RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CD79AP11912 226 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 MGMTP16455 207 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 NOVA1P51513 510 aaKnown RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 ACY1Q03154 408 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 ASPHD2Q6ICH7 369 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 ZNF501Q96CX3 271 aaPredicted RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 NSG1A0A0A6YYJ2 146 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 MBTPS2O43462 519 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 NME2P1O60361 137 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 HLA-BQ31612 363 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 ASB10Q8WXI3 467 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 RASL10BQ96S79 203 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 OR10A2Q9H208 303 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 CALHM2Q9HA72 323 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
GPC1-209ENST00000495100 EFNA2O43921 213 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 MTRF1O75570 445 aaKnown RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 DAOP14920 347 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 NAGAP17050 411 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 CD80P33681 288 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 UNC119Q13432 240 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 RAB32Q13637 225 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 COL19A1Q14993 1142 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 C3AR1Q16581 482 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 PCK2Q16822 640 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 WIPI1Q5MNZ9 446 aaPredicted RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 ZNF774Q6NX45 483 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 OR13C8Q8NGS7 320 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 CRLF2Q9HC73 371 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 C9orf170A2RU37 121 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 SNRPGP15A8MWD9 76 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 H7C2Y5 167 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 RAB27BO00194 218 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 CNOT4O95628 575 aaKnown RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 IKZF1Q13422 519 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 ZNF574Q6ZN55 896 aaPredicted RBP11.9□□□□□ -0.5
GPC1-209ENST00000495100 MOB3CQ70IA8 216 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 SUCNR1Q9BXA5 334 aa11.9□□□□□ -0.5
GPC1-209ENST00000495100 A0A1W2PQM1 296 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 SNRNP70P08621 437 aaKnown RBP11.9□□□□□ -0.51
GPC1-209ENST00000495100 TCN2P20062 427 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 GDF1P27539 372 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 AGTR1P30556 359 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 GALNSP34059 522 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 KISS1Q15726 138 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 C11orf87Q6NUJ2 197 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 BORCS8Q96FH0 119 aa11.9□□□□□ -0.51
GPC1-209ENST00000495100 SLC25A21Q9BQT8 299 aaPredicted RBP11.9□□□□□ -0.51
GPC1-209ENST00000495100 H3BP45 60 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 SPATA46Q5T0L3 261 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 SULF2Q8IWU5 870 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 SECTM1Q8WVN6 248 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 HGDQ93099 445 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 PLPPR2Q96GM1 343 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 ZCCHC4Q9H5U6 513 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 LIPT2A6NK58 231 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 TMEM200CA6NKL6 621 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 RBMXL2O75526 392 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 PSMB6P28072 239 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 CLVS2Q5SYC1 327 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 GLRX5Q86SX6 157 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 GPR137CQ8N3F9 429 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 PLA2G3Q9NZ20 509 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 G3V3Q6 166 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 M0R135 149 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 LRP3O75074 770 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 C1QL1O75973 258 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 UBBP0CG47 229 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 ZNF684Q5T5D7 378 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
GPC1-209ENST00000495100 CEP295Q9C0D2 2601 aa11.89□□□□□ -0.51
GPC1-209ENST00000495100 TRBV5-7A0A0A0MS05 114 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 LINC00862A6NCI5 91 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 CTDSPLO15194 276 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 LDOC1O95751 146 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms