RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CLN8Q9UBY8 286 aa8.83□□□□□ -1
NELFE-213ENST00000494956 NUP50Q9UKX7 468 aa8.83□□□□□ -1
NELFE-213ENST00000494956 LRP12Q9Y561 859 aa8.83□□□□□ -1
NELFE-213ENST00000494956 FBN3Q75N90 2809 aa8.82□□□□□ -1
NELFE-213ENST00000494956 ZNF850A8MQ14 1090 aa8.82□□□□□ -1
NELFE-213ENST00000494956 TRIM77I1YAP6 450 aa8.82□□□□□ -1
NELFE-213ENST00000494956 ADAM20O43506 726 aa8.82□□□□□ -1
NELFE-213ENST00000494956 LHBP01229 141 aa8.82□□□□□ -1
NELFE-213ENST00000494956 POLR2IP36954 125 aaKnown RBP8.82□□□□□ -1
NELFE-213ENST00000494956 PSMB10P40306 273 aa8.82□□□□□ -1
NELFE-213ENST00000494956 FGF12P61328 243 aa8.82□□□□□ -1
NELFE-213ENST00000494956 UBA52P62987 128 aaKnown RBP8.82□□□□□ -1
NELFE-213ENST00000494956 MFGE8Q08431 387 aaPredicted RBP8.82□□□□□ -1
NELFE-213ENST00000494956 ATP6AP1Q15904 470 aa8.82□□□□□ -1
NELFE-213ENST00000494956 C1orf146Q5VVC0 180 aa8.82□□□□□ -1
NELFE-213ENST00000494956 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
NELFE-213ENST00000494956 C12orf54Q6X4T0 127 aa8.82□□□□□ -1
NELFE-213ENST00000494956 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
NELFE-213ENST00000494956 PLEKHG7Q6ZR37 379 aa8.82□□□□□ -1
NELFE-213ENST00000494956 USP43Q70EL4 1123 aa8.82□□□□□ -1
NELFE-213ENST00000494956 NLRC3Q7RTR2 1065 aa8.82□□□□□ -1
NELFE-213ENST00000494956 KRT77Q7Z794 578 aa8.82□□□□□ -1
NELFE-213ENST00000494956 PARP8Q8N3A8 854 aa8.82□□□□□ -1
NELFE-213ENST00000494956 OR5T2Q8NGG2 359 aa8.82□□□□□ -1
NELFE-213ENST00000494956 LRTOMTQ8WZ04 291 aa8.82□□□□□ -1
NELFE-213ENST00000494956 RPL3LQ92901 407 aaKnown RBP8.82□□□□□ -1
NELFE-213ENST00000494956 ERGIC1Q969X5 290 aa8.82□□□□□ -1
NELFE-213ENST00000494956 IL4I1Q96RQ9 567 aa8.82□□□□□ -1
NELFE-213ENST00000494956 TEAD3Q99594 435 aa8.82□□□□□ -1
NELFE-213ENST00000494956 SEMA6AQ9H2E6 1030 aa8.82□□□□□ -1
NELFE-213ENST00000494956 LAMP5Q9UJQ1 280 aa8.82□□□□□ -1
NELFE-213ENST00000494956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
NELFE-213ENST00000494956 KIR2DS1A0A191URI9 304 aa8.81□□□□□ -1
NELFE-213ENST00000494956 OOEPA6NGQ2 149 aa8.81□□□□□ -1
NELFE-213ENST00000494956 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
NELFE-213ENST00000494956 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
NELFE-213ENST00000494956 CDIPTO14735 213 aa8.81□□□□□ -1
NELFE-213ENST00000494956 FSTL3O95633 263 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SFTPBP07988 381 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SELLP14151 372 aa8.81□□□□□ -1
NELFE-213ENST00000494956 AMY2BP19961 511 aa8.81□□□□□ -1
NELFE-213ENST00000494956 FPR2P25090 351 aa8.81□□□□□ -1
NELFE-213ENST00000494956 CFPP27918 469 aa8.81□□□□□ -1
NELFE-213ENST00000494956 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
NELFE-213ENST00000494956 PRB3Q04118 309 aaPredicted RBP8.81□□□□□ -1
NELFE-213ENST00000494956 PRDX4Q13162 271 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SCGB2A2Q13296 93 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SLC35D3Q5M8T2 416 aa8.81□□□□□ -1
NELFE-213ENST00000494956 BTNL3Q6UXE8 466 aa8.81□□□□□ -1
NELFE-213ENST00000494956 WDR82Q6UXN9 313 aa8.81□□□□□ -1
NELFE-213ENST00000494956 TEX29Q8N6K0 151 aa8.81□□□□□ -1
NELFE-213ENST00000494956 TCEANCQ8N8B7 351 aa8.81□□□□□ -1
NELFE-213ENST00000494956 OR52H1Q8NGJ2 320 aa8.81□□□□□ -1
NELFE-213ENST00000494956 FAM216AQ8WUB2 273 aa8.81□□□□□ -1
NELFE-213ENST00000494956 HPSE2Q8WWQ2 592 aa8.81□□□□□ -1
NELFE-213ENST00000494956 PIGCQ92535 297 aa8.81□□□□□ -1
NELFE-213ENST00000494956 ITPKCQ96DU7 683 aa8.81□□□□□ -1
NELFE-213ENST00000494956 NRBF2Q96F24 287 aa8.81□□□□□ -1
NELFE-213ENST00000494956 CCL13Q99616 98 aa8.81□□□□□ -1
NELFE-213ENST00000494956 MS4A7Q9GZW8 240 aaPredicted RBP8.81□□□□□ -1
NELFE-213ENST00000494956 WDR13Q9H1Z4 485 aa8.81□□□□□ -1
NELFE-213ENST00000494956 OPA3Q9H6K4 179 aa8.81□□□□□ -1
NELFE-213ENST00000494956 KRT84Q9NSB2 600 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SNTG1Q9NSN8 517 aa8.81□□□□□ -1
NELFE-213ENST00000494956 C14orf119Q9NWQ9 140 aa8.81□□□□□ -1
NELFE-213ENST00000494956 FAM206AQ9NX38 181 aa8.81□□□□□ -1
NELFE-213ENST00000494956 AP4S1Q9Y587 144 aa8.81□□□□□ -1
NELFE-213ENST00000494956 SAC3D1A6NKF1 404 aa8.8□□□□□ -1
NELFE-213ENST00000494956 G3V2T6 193 aa8.8□□□□□ -1
NELFE-213ENST00000494956 DVL1O14640 695 aa8.8□□□□□ -1
NELFE-213ENST00000494956 PHYHO14832 338 aa8.8□□□□□ -1
NELFE-213ENST00000494956 APOL3O95236 402 aa8.8□□□□□ -1
NELFE-213ENST00000494956 PLATP00750 562 aa8.8□□□□□ -1
NELFE-213ENST00000494956 APOC1P02654 83 aa8.8□□□□□ -1
NELFE-213ENST00000494956 GNALP38405 381 aa8.8□□□□□ -1
NELFE-213ENST00000494956 DDOSTP39656 456 aa8.8□□□□□ -1
NELFE-213ENST00000494956 DLX1P56177 255 aa8.8□□□□□ -1
NELFE-213ENST00000494956 CEP78Q5JTW2 689 aa8.8□□□□□ -1
NELFE-213ENST00000494956 SLX4IPQ5VYV7 408 aa8.8□□□□□ -1
NELFE-213ENST00000494956 TEX36Q5VZQ5 186 aa8.8□□□□□ -1
NELFE-213ENST00000494956 C12orf73Q69YU5 71 aa8.8□□□□□ -1
NELFE-213ENST00000494956 KDM4DQ6B0I6 523 aa8.8□□□□□ -1
NELFE-213ENST00000494956 RHOUQ7L0Q8 258 aa8.8□□□□□ -1
NELFE-213ENST00000494956 DOK3Q7L591 496 aa8.8□□□□□ -1
NELFE-213ENST00000494956 PDZD9Q8IXQ8 264 aa8.8□□□□□ -1
NELFE-213ENST00000494956 SPERTQ8NA61 448 aa8.8□□□□□ -1
NELFE-213ENST00000494956 ZFAND2BQ8WV99 257 aa8.8□□□□□ -1
NELFE-213ENST00000494956 ST8SIA4Q92187 359 aa8.8□□□□□ -1
NELFE-213ENST00000494956 GCDHQ92947 438 aaPredicted RBP8.8□□□□□ -1
NELFE-213ENST00000494956 UPRTQ96BW1 309 aa8.8□□□□□ -1
NELFE-213ENST00000494956 FAM71F1Q96KD3 344 aaPredicted RBP8.8□□□□□ -1
NELFE-213ENST00000494956 OR8B4Q96RC9 309 aa8.8□□□□□ -1
NELFE-213ENST00000494956 PKP2Q99959 881 aa8.8□□□□□ -1
NELFE-213ENST00000494956 APOL4Q9BPW4 351 aa8.8□□□□□ -1
NELFE-213ENST00000494956 PCGF1Q9BSM1 259 aa8.8□□□□□ -1
NELFE-213ENST00000494956 YIPF3Q9GZM5 350 aa8.8□□□□□ -1
NELFE-213ENST00000494956 TNFRSF19Q9NS68 423 aa8.8□□□□□ -1
NELFE-213ENST00000494956 ERVK-18Q9QC07 812 aa8.8□□□□□ -1
NELFE-213ENST00000494956 NOP16Q9Y3C1 178 aaKnown RBP8.8□□□□□ -1
NELFE-213ENST00000494956 TRAV38-1A0A0B4J264 116 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms