RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TRBV4-1A0A0J9YWV2 114 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 A0A1W2PQ09 198 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 OR6C68A6NDL8 312 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 IDH3BO43837 385 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 SLC7A2P52569 658 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 CSNK2BP67870 215 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 LIPEQ05469 1076 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 NDUFA11Q86Y39 141 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 ZDHHC21Q8IVQ6 265 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 CYB561A3Q8NBI2 242 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 OR5D13Q8NGL4 314 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 ITPKCQ96DU7 683 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 MED30Q96HR3 178 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 TLNRD1Q9H1K6 362 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 MEGF9Q9H1U4 602 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 HAO2Q9NYQ3 351 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 NDUFAF4Q9P032 175 aa14.39□□□□□ -0.11
NUP50-218ENST00000493456 SLC25A10Q9UBX3 287 aaPredicted RBP14.39□□□□□ -0.11
NUP50-218ENST00000493456 SELLP14151 372 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 AMY2BP19961 511 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 CAV3P56539 151 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 SLC15A3Q8IY34 581 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 FAM162AQ96A26 154 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 SEH1LQ96EE3 360 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 DHRS1Q96LJ7 313 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 KCNJ15Q99712 375 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 MMP28Q9H239 520 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 SAR1AQ9NR31 198 aa14.38□□□□□ -0.11
NUP50-218ENST00000493456 GMPR2Q9P2T1 348 aaKnown RBP14.38□□□□□ -0.11
NUP50-218ENST00000493456 CDIPTO14735 213 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 SLC2A1P11166 492 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 RPS27P42677 84 aaKnown RBP14.37□□□□□ -0.11
NUP50-218ENST00000493456 GSK3BP49841 420 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 PRKXP51817 358 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 FAM3AP98173 230 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 TAF13Q15543 124 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 ZNF788Q6ZQV5 615 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 SLC16A9Q7RTY1 509 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 DCXRQ7Z4W1 244 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 LYG1Q8N1E2 194 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 PROKR2Q8NFJ6 384 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 OR10Z1Q8NGY1 313 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 C17orf50Q8WW18 174 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 RORBQ92753 470 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 RCN3Q96D15 328 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 RAB3IPQ96QF0 476 aaPredicted RBP14.37□□□□□ -0.11
NUP50-218ENST00000493456 FUZQ9BT04 418 aa14.37□□□□□ -0.11
NUP50-218ENST00000493456 ZNF878C9JN71 531 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 SIGLEC5O15389 551 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 NDUFB7P17568 137 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 PAICSP22234 425 aaKnown RBP14.36□□□□□ -0.11
NUP50-218ENST00000493456 CFL1P23528 166 aaKnown RBP14.36□□□□□ -0.11
NUP50-218ENST00000493456 GNALP38405 381 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.36□□□□□ -0.11
NUP50-218ENST00000493456 KRT72Q14CN4 511 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 SNCBQ16143 134 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 DGUOKQ16854 277 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 TIGD6Q17RP2 521 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 FOXB2Q5VYV0 432 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 HCP5Q6MZN7 132 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 OR5T2Q8NGG2 359 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 OR52J3Q8NH60 311 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 SLAMF6Q96DU3 332 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 DUS3LQ96G46 650 aaKnown RBP14.36□□□□□ -0.11
NUP50-218ENST00000493456 AJUBAQ96IF1 538 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 GAFA1Q96PS6 74 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 SP140LQ9H930 580 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 ZNF391Q9UJN7 358 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 N6AMT1Q9Y5N5 214 aa14.36□□□□□ -0.11
NUP50-218ENST00000493456 TRBV23-1A0A0A0MS06 115 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 HMGB1P1B2RPK0 211 aaPredicted RBP14.35□□□□□ -0.11
NUP50-218ENST00000493456 H0YAE9 185 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 NME4O00746 187 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 TBX1O43435 398 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 ANGPTL7O43827 346 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 CHST1O43916 411 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 CD28P10747 220 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 POU1F1P28069 291 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 PYCR1P32322 319 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 MXRA7P84157 204 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 IL5RAQ01344 420 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 FTMTQ8N4E7 242 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 CSNK2A3Q8NEV1 391 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 OR2T4Q8NH00 348 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 ANGPTL6Q8NI99 470 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 REEP6Q96HR9 211 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 C7orf34Q96L11 122 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 MICU1Q9BPX6 476 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 PAPOLGQ9BWT3 736 aaKnown RBP14.35□□□□□ -0.11
NUP50-218ENST00000493456 WDR13Q9H1Z4 485 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 SNTG1Q9NSN8 517 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 CENPMQ9NSP4 180 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 CD300AQ9UGN4 299 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 COMMD3-BMI1R4GMX3 469 aa14.35□□□□□ -0.11
NUP50-218ENST00000493456 hCG_38984A0A1B0GV85 526 aa14.34□□□□□ -0.11
NUP50-218ENST00000493456 TVP23AA6NH52 213 aa14.34□□□□□ -0.11
NUP50-218ENST00000493456 TMEM210A6NLX4 147 aa14.34□□□□□ -0.11
NUP50-218ENST00000493456 ANXA2P2A6NMY6 339 aa14.34□□□□□ -0.11
NUP50-218ENST00000493456 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms