RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 DHRS3O75911 302 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 CST4P01036 141 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 HTR1AP08908 422 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 LIMS3P0CW19 117 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 LIMS4P0CW20 117 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 MYL12AP19105 171 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 CCL1P22362 96 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 MYF6P23409 242 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 ACKR3P25106 362 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 PSMB10P40306 273 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 CCR9P51686 369 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 MAB21L1Q13394 359 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 SPRNQ5BIV9 151 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 WDR38Q5JTN6 314 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 LAIR2Q6ISS4 152 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 FDX2Q6P4F2 183 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 DOK3Q7L591 496 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 BPIFB6Q8NFQ5 453 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 OR2G2Q8NGZ5 317 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 PELI1Q96FA3 418 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 TIMD4Q96H15 378 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 FAM71F1Q96KD3 344 aaPredicted RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 SOX7Q9BT81 388 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 PAPOLGQ9BWT3 736 aaKnown RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 GCM1Q9NP62 436 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 C14orf119Q9NWQ9 140 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 ENPP5Q9UJA9 477 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 RAB26Q9ULW5 256 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 SLC22A13Q9Y226 551 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 EXOSC1Q9Y3B2 195 aaKnown RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 RHBDD3Q9Y3P4 386 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 CACNG2Q9Y698 323 aa9.16□□□□□ -0.94
ATG4B-219ENST00000479941 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
ATG4B-219ENST00000479941 A0A1B0GTI1 187 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 A0A1B0GVI7 797 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 LRRC30A6NM36 301 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 ANXA2P2A6NMY6 339 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 P2RY10O00398 339 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 SYT7O43581 403 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 XPNPEP2O43895 674 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 RPSAP08865 295 aaKnown RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 ZNF12P17014 697 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 CHN2P52757 468 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 ST3GAL4Q11206 333 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 ZNF181Q2M3W8 571 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 C6orf141Q5SZD1 244 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 TMEM244Q5VVB8 128 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 TMPRSS11AQ6ZMR5 421 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 Q6ZSR3 168 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 BIVMQ86UB2 503 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PRSS35Q8N3Z0 413 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 STX19Q8N4C7 294 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 KLHL36Q8N4N3 616 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 OR8S1Q8NH09 359 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PIGCQ92535 297 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 HPS1Q92902 700 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 RAB1CQ92928 201 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 DVL3Q92997 716 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 HIST1H2AAQ96QV6 131 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 MICU1Q9BPX6 476 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 ISG20L2Q9H9L3 353 aaKnown RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 SCN3BQ9NY72 215 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 TREM2Q9NZC2 230 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 FRRS1LQ9P0K9 344 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PSORS1C1Q9UIG5 152 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 PIGLQ9Y2B2 252 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 CAB39Q9Y376 341 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-219ENST00000479941 V9GYS6 101 aa9.15□□□□□ -0.94
ATG4B-219ENST00000479941 NIPBLQ6KC79 2804 aaeCLIP9.14□□□□□ -0.95
ATG4B-219ENST00000479941 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ZNF850A8MQ14 1090 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 SLC1A7O00341 560 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ISG15P05161 165 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 KIR3DL2P43630 455 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 TGM4P49221 684 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ETV1P50549 477 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 GBX2P52951 348 aaPredicted RBP9.14□□□□□ -0.95
ATG4B-219ENST00000479941 CDH15P55291 814 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 NANOS3P60323 173 aaKnown RBP9.14□□□□□ -0.95
ATG4B-219ENST00000479941 PRDX4Q13162 271 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ALKBH1Q13686 389 aaKnown RBP9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 PRAMEF6Q5VXH4 476 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 AHSA2Q719I0 299 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 MOGAT3Q86VF5 341 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ZDHHC23Q8IYP9 409 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 C1orf87Q8N0U7 546 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 OR11L1Q8NGX0 322 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 OR14K1Q8NGZ2 314 aa9.14□□□□□ -0.95
ATG4B-219ENST00000479941 ZNF420Q8TAQ5 688 aaPredicted RBP9.14□□□□□ -0.95
ATG4B-219ENST00000479941 Q8TCH9 128 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms