RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RETP07949 1114 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACSM4P0C7M7 580 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 GIMD1P0DJR0 217 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CAPN2P17655 700 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 IVDP26440 423 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 FMO3P31513 532 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 VDAC2P45880 294 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 P2RY4P51582 365 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CLDN6P56747 220 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TRAM2Q15035 370 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TNXAQ16473 311 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ATP6V1FQ16864 119 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZCWPW2Q504Y3 356 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMUG1Q53HV7 270 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 KLF17Q5JT82 389 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CEP85LQ5SZL2 805 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SDHAF4Q5VUM1 108 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 THOC7Q6I9Y2 204 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 METTL7BQ6UX53 244 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CXCL17Q6UXB2 119 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TFAP2EQ6VUC0 442 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CERS6Q6ZMG9 384 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF720Q7Z2F6 126 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 LHFPL3Q86UP9 236 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 FUNDC1Q8IVP5 155 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 RDH10Q8IZV5 341 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 PDIK1LQ8N165 341 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF557Q8N988 423 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF738Q8NE65 137 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TTLQ8NG68 377 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR5B17Q8NGF7 314 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2L2Q8NH16 312 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 DNAJB3Q8WWF6 145 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 S100PBPQ96BU1 408 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF599Q96NL3 588 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 CIB1Q99828 191 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 EBF4Q9BQW3 602 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 BEX2Q9BXY8 128 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 POTEKPQ9BYX7 375 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 Q9H3A6 140 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 PLGRKTQ9HBL7 147 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 EML4Q9HC35 981 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 MED4Q9NPJ6 270 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SIRT7Q9NRC8 400 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 AGPAT4Q9NRZ5 378 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TREX1Q9NSU2 369 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 FGFR1OP2Q9NVK5 253 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 DNAJC12Q9UKB3 198 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 NXT1Q9UKK6 140 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC17A4Q9Y2C5 497 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 UGT2A1Q9Y4X1 527 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 HES2Q9Y543 173 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 TSSC4Q9Y5U2 329 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIF26AQ9ULI4 1882 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 PTPRDP23468 1912 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 GREB1Q4ZG55 1949 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 MICAL3Q7RTP6 2002 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TSC2P49815 1807 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PATJQ8NI35 1801 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGLV8-61A0A075B6I0 122 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV1OR15-1A0A075B7D0 117 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV3OR16-13A0A075B7E8 117 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 A0A087X0T9 212 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV7-81A0A0B4J1V7 117 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PRSS37A4D1T9 235 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC22A20A6NK97 555 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 E5RI56 91 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 F6UB75 175 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 GPR171O14626 319 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SNAI2O43623 268 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 GMDSO60547 372 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 EIF4E2O60573 245 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SNAPINO95295 136 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IFNA6P05013 189 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAM228BP0C875 321 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMIM10L1P0DMW3 83 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CXCL8P10145 99 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PSKH1P11801 424 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF250P15622 560 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 RGRP47804 291 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TFPI2P48307 235 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CSNK1DP48730 415 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 RORCP51449 518 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CCR8P51685 355 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 UGT2B15P54855 530 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TAS2R60P59551 318 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 UBE2MP61081 183 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 RPL10AP62906 217 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC35B1P78383 322 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TFAMQ00059 246 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CKAP4Q07065 602 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CYP24A1Q07973 514 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 LAMTOR4Q0VGL1 99 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TWF1Q12792 350 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 FLOT2Q14254 428 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CAPRIN1Q14444 709 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ATP6AP1Q15904 470 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 KYAT1Q16773 422 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms