RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM255AQ5JRV8 349 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 TEX36Q5VZQ5 186 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 TMEM236Q5W0B7 351 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 FAHD2BQ6P2I3 314 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 FDX2Q6P4F2 183 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ZNF322Q6U7Q0 402 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 ZBTB49Q6ZSB9 765 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 C1orf122Q6ZSJ8 110 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 FAM57BQ71RH2 274 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 SLC36A1Q7Z2H8 476 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 THAP5Q7Z6K1 395 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 FAM90A1Q86YD7 464 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ELMOD2Q8IZ81 293 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 OR5AS1Q8N127 324 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 IQCF1Q8N6M8 205 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 PACRGLQ8N7B6 248 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 PNLDC1Q8NA58 520 aaKnown RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 SEMA6DQ8NFY4 1073 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 OR8B3Q8NGG8 313 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 NPRL2Q8WTW4 380 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 FAHD2AQ96GK7 314 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 OR8B2Q96RD0 313 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 SOX7Q9BT81 388 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 SSBP3Q9BWW4 388 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 TLNRD1Q9H1K6 362 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 POFUT1Q9H488 388 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 C7orf69Q9H7B7 122 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 MED20Q9H944 212 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ZMAT3Q9HA38 289 aaKnown RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 SEBOXQ9HB31 216 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 RHOFQ9HBH0 211 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 S100A14Q9HCY8 104 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 INPP5EQ9NRR6 644 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 MRPS18AQ9NVS2 196 aaKnown RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 ENPP5Q9UJA9 477 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 LRP12Q9Y561 859 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 CSPG4Q6UVK1 2322 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 CCDC182A6NF36 153 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 OOEPA6NGQ2 149 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 E9PQ18 207 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 LOC110117498-PIK3R3F6TDL0 507 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 H0YL77 283 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 TNFRSF13BO14836 293 aaPredicted RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 SELENOFO60613 162 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 NOS1APO75052 506 aaPredicted RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 DHRS3O75911 302 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 FADS2O95864 444 aaKnown RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 ISG15P05161 165 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 RPS2P15880 293 aaKnown RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 IL2RGP31785 369 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 RPS27P42677 84 aaKnown RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 CXCR4P61073 352 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ACTA2P62736 377 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ACTG2P63267 376 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 CSNK2BP67870 215 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PAX8Q06710 450 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 IL18R1Q13478 541 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 MED21Q13503 144 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ZSCAN26Q16670 478 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 AVPI1Q5T686 147 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 TMEM244Q5VVB8 128 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 TTC23Q5W5X9 447 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 DOK3Q7L591 496 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 C1QL2Q7Z5L3 287 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 MOGAT3Q86VF5 341 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ZNF573Q86YE8 665 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 SLC35F2Q8IXU6 374 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 SYS1Q8N2H4 156 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PQLC1Q8N2U9 271 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ACBD7Q8N6N7 88 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 DTX3Q8N9I9 347 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 BHLHE23Q8NDY6 225 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ZNF555Q8NEP9 628 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 OR1M1Q8NGA1 313 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 OR56B2PQ8NGI1 322 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 RHOXF1Q8NHV9 184 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 FAM81AQ8TBF8 368 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PYDC1Q8WXC3 89 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PP6455Q8WZ26 134 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 OR5P3Q8WZ94 311 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 EME1Q96AY2 570 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 RNF170Q96K19 258 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 APOL4Q9BPW4 351 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 TMEM246Q9BRR3 403 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 SUCNR1Q9BXA5 334 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 PBOV1Q9GZY1 135 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 SEMA6AQ9H2E6 1030 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ADGRL4Q9HBW9 690 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 FAM206AQ9NX38 181 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 UBAP1Q9NZ09 502 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 CLN8Q9UBY8 286 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 IKZF2Q9UKS7 526 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 EXOGQ9Y2C4 368 aaKnown RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 POLDIP2Q9Y2S7 368 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 RPL36Q9Y3U8 105 aaKnown RBP5.36□□□□□ -1.55
USP54-202ENST00000413442 INSIG2Q9Y5U4 225 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms