RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR11A1Q9GZK7 315 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 VCX3BQ9H321 246 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 ABCB9Q9NP78 766 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 MED4Q9NPJ6 270 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 VAX2Q9UIW0 290 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 C3orf18Q9UK00 162 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 NEUROG3Q9Y4Z2 214 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 MTCH2Q9Y6C9 303 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 A0A0G2JN53 185 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 A0A1W2PPR1 153 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 GJE1A6NN92 205 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 PEX7O00628 323 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 UBDO15205 165 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 KMOO15229 486 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 SYNGR1O43759 233 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 OR5F1O95221 314 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 CEACAM6P40199 344 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 ZNF138P52744 262 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 CACNG7P62955 275 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 MS4A2Q01362 244 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 NSDHLQ15738 373 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 GSG1Q2KHT4 349 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 ZNF630Q2M218 657 aaPredicted RBP3.65□□□□□ -1.83
LSM5-205ENST00000409952 PDZD11Q5EBL8 140 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 CGB2Q6NT52 195 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 ZNF493Q6ZR52 646 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 Q8N402 240 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 PIFOQ8TCI5 191 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 C7orf33Q8WU49 177 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 HAUS1Q96CS2 278 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 MBOAT7Q96N66 472 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 DHX35Q9H5Z1 703 aaKnown RBP3.65□□□□□ -1.83
LSM5-205ENST00000409952 MYOZ1Q9NP98 299 aaPredicted RBP3.65□□□□□ -1.83
LSM5-205ENST00000409952 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
LSM5-205ENST00000409952 BABAM2Q9NXR7 383 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 PCDH11XQ9BZA7 1347 aa3.65□□□□□ -1.83
LSM5-205ENST00000409952 UNC13AQ9UPW8 1703 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 CIB4A0PJX0 185 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 LRRN3E7EW58 273 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 KRTAP4-16G5E9R7 235 aaPredicted RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 H0Y980 276 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 M0QZ92 97 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 FAM189A1O60320 539 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 RAD1O60671 282 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 ATP6V1G2O95670 118 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 IFNA5P01569 189 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 APOEP02649 317 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 CTXN2P0C2S0 81 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 GGT2P36268 569 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 P2RX1P51575 399 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 P2RY4P51582 365 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 NDUFA8P51970 172 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 NKX2-5P52952 324 aaPredicted RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 MTPNP58546 118 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 AP3S2P59780 193 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 CDNFQ49AH0 187 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 ZNF343Q6P1L6 599 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 USP50Q70EL3 339 aaPredicted RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 NR2C2APQ86WQ0 139 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 ZNF786Q8N393 782 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 UBAC2Q8NBM4 344 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 OR11H7Q8NGC8 314 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 FAM45AQ8TCE6 357 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 CREB3L1Q96BA8 519 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 DCPSQ96C86 337 aaKnown RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 LRRC58Q96CX6 371 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 TMEM56Q96MV1 263 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 GPR22Q99680 433 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 PAXXQ9BUH6 204 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 C9orf16Q9BUW7 83 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 LHX5Q9H2C1 402 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 OR51V1Q9H2C8 321 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 CLMPQ9H6B4 373 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 HRASLSQ9HDD0 168 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 SLCO1B3Q9NPD5 702 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 RRAGDQ9NQL2 400 aaPredicted RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 FGFR1OP2Q9NVK5 253 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 ANXA10Q9UJ72 324 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 MOKQ9UQ07 419 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
LSM5-205ENST00000409952 CECR2Q9BXF3 1484 aa3.64□□□□□ -1.83
LSM5-205ENST00000409952 RAB3GAP2Q9H2M9 1393 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 ERCC6L2Q5T890 1561 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 A0A0J9YXY3 114 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 IFITM10A6NMD0 228 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 OR2AT4A6NND4 320 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 H0Y9J4 135 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 H7C423 109 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 M0R036 132 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 IGHV3-13P01766 116 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 BGLAPP02818 100 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 RLN2P04090 185 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 MMP7P09237 267 aaPredicted RBP3.63□□□□□ -1.83
LSM5-205ENST00000409952 TDGF1P13385 188 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 NQO1P15559 274 aaKnown RBP3.63□□□□□ -1.83
LSM5-205ENST00000409952 RAB3AP20336 220 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 PPP1R2P41236 205 aa3.63□□□□□ -1.83
LSM5-205ENST00000409952 CAV2P51636 162 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms