RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PTGR1Q14914 329 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ZNHIT3Q15649 155 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 RAB11BQ15907 218 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 IMPG1Q17R60 797 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PRR30Q53SZ7 412 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 RNASE10Q5GAN6 216 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 LCN1P1Q5VSP4 162 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 GGNBP1Q5YKI7 109 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SAXO2Q658L1 398 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM225Q6GV28 225 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TCTN3Q6NUS6 607 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PLET1Q6UQ28 207 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CASP12Q6UXS9 341 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RBMS3Q6XE24 437 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 SPNS3Q6ZMD2 512 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 GDPGP1Q6ZNW5 385 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 C16orf47Q6ZP98 133 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 RASSF6Q6ZTQ3 369 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 NDUFAF7Q7L592 441 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DCXRQ7Z4W1 244 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ANGPTL5Q86XS5 388 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 VRK2Q86Y07 508 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TGIF2LXQ8IUE1 241 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CCDC71Q8IV32 467 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 RIMKLAQ8IXN7 391 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM132CQ8N3T6 1108 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PRSS35Q8N3Z0 413 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF843Q8N446 348 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SYT14Q8NB59 555 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SCCPDHQ8NBX0 429 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PLPP5Q8NEB5 264 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 OR5T1Q8NG75 326 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 OR11H4Q8NGC9 324 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 OR10A7Q8NGE5 316 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 OR2T11Q8NH01 316 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ABHD4Q8TB40 342 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TWIST2Q8WVJ9 160 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TCTEX1D2Q8WW35 142 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PSMF1Q92530 271 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RAB1CQ92928 201 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 POP5Q969H6 163 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 PINX1Q96BK5 328 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 ANKRD9Q96BM1 317 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 OTULINQ96BN8 352 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 COQ8BQ96D53 544 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 MALSU1Q96EH3 234 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SENP5Q96HI0 755 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 IMMP1LQ96LU5 166 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 IP6K3Q96PC2 410 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TECTBQ96PL2 329 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 LPAR4Q99677 370 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 HOPXQ9BPY8 73 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 SPATA25Q9BR10 227 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PRRG4Q9BZD6 226 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 OR8D2Q9GZM6 311 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 LYRM4Q9HD34 91 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 MAN2C1Q9NTJ4 1040 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ZFP57Q9NU63 452 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 P2RX2Q9UBL9 471 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 VPS29Q9UBQ0 182 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4Q9UBX2 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 MARCOQ9UEW3 520 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 PLEKHB1Q9UF11 243 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 C19orf25Q9UFG5 118 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 ZDHHC2Q9UIJ5 367 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF223Q9UK11 482 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 ADAM29Q9UKF5 820 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RNF6Q9Y252 685 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CARHSP1Q9Y2V2 147 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 MMACHCQ9Y4U1 282 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 LRP12Q9Y561 859 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DNAJC15Q9Y5T4 150 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PRRC2CQ9Y520 2896 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MEIKINA0A087WXM9 373 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TRBV11-1A0A0K0K1C0 115 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 BBIP1A8MTZ0 92 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 C17orf105B2RV13 164 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 C9JVG2 144 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TEX46H3BTG2 121 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CLIC1O00299 241 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 AIREO43918 545 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 FADS1O60427 444 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 AQP8O94778 261 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 ATG12O94817 140 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 NXPH2O95156 264 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LRATO95237 230 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 AHSA1O95433 338 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SERPINA7P05543 415 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 ANXA4P09525 319 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CD3GP09693 182 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CSF3P09919 207 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CT62P0C5K7 136 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 ANXA3P12429 323 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 PVALBP20472 110 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 DDTP30046 118 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MAP3K8P41279 467 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TSFMP43897 325 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 OMPP47874 163 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LIMS1P48059 325 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MRPL19P49406 292 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms