RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MICBQ29980 383 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 FAHD1Q6P587 224 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF826PQ6ZT77 177 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 PRSS45Q7RTY3 260 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 ZDHHC13Q8IUH4 622 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 FAM81AQ8TBF8 368 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 UTP4Q969X6 686 aaKnown RBP11.46□□□□□ -0.57
CXCL12-205ENST00000395794 UPRTQ96BW1 309 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 HIST1H2AAQ96QV6 131 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 TEAD3Q99594 435 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 RTL8AQ9BWD3 113 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 RNPEPL1Q9HAU8 725 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 RHBDD3Q9Y3P4 386 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 MPC1Q9Y5U8 109 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 ACOD1A6NK06 481 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 CIB2O75838 187 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 GYPAP02724 150 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 ALOX5APP20292 161 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 SLC2A5P22732 501 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 DAPP51397 102 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 PAX2Q02962 417 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 BAMBIQ13145 260 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 KLF17Q5JT82 389 aaPredicted RBP11.45□□□□□ -0.58
CXCL12-205ENST00000395794 DEGS2Q6QHC5 323 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 KCTD8Q6ZWB6 473 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 DOK3Q7L591 496 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 COMMD2Q86X83 199 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 GALNT4Q8N4A0 578 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 PNLDC1Q8NA58 520 aaKnown RBP11.45□□□□□ -0.58
CXCL12-205ENST00000395794 OR1M1Q8NGA1 313 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 LRRC29Q8WV35 223 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 ASB17Q8WXJ9 295 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 ZMAT3Q9HA38 289 aaKnown RBP11.45□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF319Q9P2F9 582 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 LRP12Q9Y561 859 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 AP4S1Q9Y587 144 aa11.45□□□□□ -0.58
CXCL12-205ENST00000395794 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 TMEM269A0A1B0GVZ9 245 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 TMPRSS2O15393 492 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF254O75437 659 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 CST4P01036 141 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 LHBP01229 141 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
CXCL12-205ENST00000395794 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-205ENST00000395794 MAP2K3P46734 347 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 HCCSP53701 268 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 ACTR3P61158 418 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 FGF12P61328 243 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
CXCL12-205ENST00000395794 PRDX4Q13162 271 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 GCSAMQ8N6F7 178 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 ZDHHC22Q8N966 263 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 OR8B12Q8NGG6 310 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 PIGCQ92535 297 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 ITFG2Q969R8 447 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 CNN2Q99439 309 aaKnown RBP11.44□□□□□ -0.58
CXCL12-205ENST00000395794 IKZF2Q9UKS7 526 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 KLHDC2Q9Y2U9 406 aa11.44□□□□□ -0.58
CXCL12-205ENST00000395794 IGHV3OR15-7A0A075B7D8 119 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 TRAV40A0A0B4J280 105 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 SLC22A31A6NKX4 558 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 TMEM210A6NLX4 147 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF850A8MQ14 1090 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 CDIPTO14735 213 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ECDO95905 644 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 RIDAP52758 137 aaKnown RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 BPIFB3P59826 476 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 HOXA4Q00056 320 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 POU4F2Q12837 409 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 C11orf91Q3C1V1 193 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF829Q3KNS6 432 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 MEPCEQ7L2J0 689 aaKnown RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 SLC36A1Q7Z2H8 476 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 THAP5Q7Z6K1 395 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ZDHHC23Q8IYP9 409 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF679Q8IYX0 411 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-205ENST00000395794 SLC25A28Q96A46 364 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 RNF170Q96K19 258 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 MNTQ99583 582 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 PKP2Q99959 881 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 ESM1Q9NQ30 184 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 CTSZQ9UBR2 303 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 DNAJB11Q9UBS4 358 aa11.43□□□□□ -0.58
CXCL12-205ENST00000395794 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
CXCL12-205ENST00000395794 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
CXCL12-205ENST00000395794 ZNF879B4DU55 563 aa11.42□□□□□ -0.58
CXCL12-205ENST00000395794 C22orf46C9J442 243 aa11.42□□□□□ -0.58
CXCL12-205ENST00000395794 PSMD9O00233 223 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms