RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 RPH3AQ9Y2J0 694 aaPredicted RBP18.22■□□□□ 0.51
CLK3-202ENST00000395066 HTR3BO95264 441 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 CX3CR1P49238 355 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 ZNF41P51814 821 aaPredicted RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 UEVLDQ8IX04 471 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 ZSCAN4Q8NAM6 433 aaPredicted RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 GLYATL2Q8WU03 294 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 ARHGAP5-AS1Q96IT6 56 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 UQCC2Q9BRT2 126 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 B3GALT5Q9Y2C3 310 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 SDCBPO00560 298 aaPredicted RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 OR2J2O76002 312 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 SPP1P10451 314 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 HOXB1P14653 301 aaPredicted RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 CYCSP99999 105 aaKnown RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 SMAD4Q13485 552 aaKnown RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 PLPPR5Q32ZL2 321 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 FAM57BQ71RH2 274 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 OR2AJ1Q8NGZ0 328 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 RAB3CQ96E17 227 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 LIN37Q96GY3 246 aaPredicted RBP18.21■□□□□ 0.51
CLK3-202ENST00000395066 C5orf66Q9H5L9 145 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 LHX6Q9UPM6 363 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 EML6Q6ZMW3 1958 aa18.21■□□□□ 0.51
CLK3-202ENST00000395066 NCOA6Q14686 2063 aaPredicted RBP18.21■□□□□ 0.5
CLK3-202ENST00000395066 H0YIZ8 118 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 CRTAPO75718 401 aaPredicted RBP18.2■□□□□ 0.5
CLK3-202ENST00000395066 FAM157CP0CG43 387 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 PGA4P0DJD7 388 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 PGA3P0DJD8 388 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 GLB1P16278 677 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 ZNF529Q6P280 563 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 IL34Q6ZMJ4 242 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 HOGA1Q86XE5 327 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 TMEM230Q96A57 120 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 GPER1Q99527 375 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 MSGN1A6NI15 193 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 ZNF705EA8MWA4 302 aaPredicted RBP18.2■□□□□ 0.5
CLK3-202ENST00000395066 CDC14BO60729 498 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 TAS2R31P59538 309 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 PJVKQ0ZLH3 352 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 AVPI1Q5T686 147 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 ZNF574Q6ZN55 896 aaPredicted RBP18.2■□□□□ 0.5
CLK3-202ENST00000395066 TMEM200AQ86VY9 491 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 DTWD2Q8NBA8 298 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 NOXO1Q8NFA2 376 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 CDC6Q99741 560 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 CMSS1Q9BQ75 279 aaKnown RBP18.2■□□□□ 0.5
CLK3-202ENST00000395066 METTL7AQ9H8H3 244 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 KLHL13Q9P2N7 655 aa18.2■□□□□ 0.5
CLK3-202ENST00000395066 ZNF878C9JN71 531 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 CRYBA1P05813 215 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 IGFBP4P22692 258 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 MEOX2P50222 304 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 S100A12P80511 92 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 MST1LQ2TV78 715 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 C1QL2Q7Z5L3 287 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 DTX1Q86Y01 620 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 C2CD4CQ8TF44 421 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 OR6C1Q96RD1 312 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 WDR77Q9BQA1 342 aaPredicted RBP18.19■□□□□ 0.5
CLK3-202ENST00000395066 ST6GALNAC5Q9BVH7 336 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 TRAF3IP2O43734 574 aaPredicted RBP18.19■□□□□ 0.5
CLK3-202ENST00000395066 TBPP20226 339 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 PTGDSP41222 190 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 PDZK1IP1Q13113 114 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 NKAIN1Q4KMZ8 207 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 PRAMEF20Q5VT98 475 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 LCN10Q6JVE6 187 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 RXFP4Q8TDU9 374 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 TMEM59Q9BXS4 323 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 AKIRIN1Q9H9L7 192 aaPredicted RBP18.19■□□□□ 0.5
CLK3-202ENST00000395066 ADAMTS20P59510 1910 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 KCNJ3P48549 501 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 P2RY4P51582 365 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 SGCAQ16586 387 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 THEM4Q5T1C6 240 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 DRAM2Q6UX65 266 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 OR6S1Q8NH40 331 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 TERB2Q8NHR7 220 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 LPAR3Q9UBY5 353 aa18.19■□□□□ 0.5
CLK3-202ENST00000395066 SDK2Q58EX2 2172 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 IGKV1-9A0A0C4DH69 117 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 APOC1P02654 83 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 HEXAP06865 529 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 QDPRP09417 244 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 HIST1H1DP16402 221 aaKnown RBP18.18■□□□□ 0.5
CLK3-202ENST00000395066 NFYBP25208 207 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 GABREP78334 506 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 RHBDD2Q6NTF9 364 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 ZNF585AQ6P3V2 769 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 DMBX1Q8NFW5 382 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 ACKR4Q9NPB9 350 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 FAM96BQ9Y3D0 163 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 IGHG1P01857 330 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 ARFRP1Q13795 201 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 TMEM128Q5BJH2 165 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 CLEC18BQ6UXF7 455 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 ZFP82Q8N141 532 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 ZNF283Q8N7M2 679 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms