RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 IL20Q9NYY1 176 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 CD300AQ9UGN4 299 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 DHRS12A0PJE2 317 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-202ENST00000374426 CDIPTO14735 213 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 GPR37O15354 613 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 TBX1O43435 398 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 NDUFB3O43676 98 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 TIPRLO75663 272 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 FABP3P05413 133 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 GYPBP06028 91 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 CSF1P09603 554 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 EEF1B2P24534 225 aaKnown RBP11.29□□□□□ -0.6
CXCL12-202ENST00000374426 FMO3P31513 532 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 SAA4P35542 130 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 CRMP1Q14194 572 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 KLHL12Q53G59 568 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 TEX30Q5JUR7 227 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 ATPAF1Q5TC12 328 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-202ENST00000374426 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 RPL13AP3Q6NVV1 102 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 OR5T2Q8NGG2 359 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 MCUR1Q96AQ8 359 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 CMTM5Q96DZ9 223 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 NMNAT2Q9BZQ4 307 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 TLNRD1Q9H1K6 362 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 IL1RAPQ9NPH3 570 aa11.29□□□□□ -0.6
CXCL12-202ENST00000374426 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 MEIOCA2RUB1 952 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 G3V4G9 280 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 PAHP00439 452 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 ANXA2P07355 339 aaKnown RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 CLUP10909 449 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 SPI1P17947 270 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 MSX2P35548 267 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 NAA10P41227 235 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 SLC15A1P46059 708 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 CX3CR1P49238 355 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 GSK3AP49840 483 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 GRB2P62993 217 aaKnown RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 TIGD6Q17RP2 521 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 PAPOLGQ9BWT3 736 aaKnown RBP11.28□□□□□ -0.6
CXCL12-202ENST00000374426 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 PPA2Q9H2U2 334 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 ZNF319Q9P2F9 582 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 MAGEL2Q9UJ55 1249 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 RHBDD3Q9Y3P4 386 aa11.28□□□□□ -0.6
CXCL12-202ENST00000374426 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.6
CXCL12-202ENST00000374426 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 ARPC2O15144 300 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 TFF1P04155 84 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 HSD17B1P14061 328 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 GABRA5P31644 462 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 UBE2E1P51965 193 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 HMGA2P52926 109 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 SLC25A1P53007 311 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 GMFBP60983 142 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-202ENST00000374426 C1orf122Q6ZSJ8 110 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 FAM57BQ71RH2 274 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 OR6K6Q8NGW6 343 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 NSMCE2Q96MF7 247 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 RAB3IPQ96QF0 476 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-202ENST00000374426 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 SNTG1Q9NSN8 517 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 LYVE1Q9Y5Y7 322 aa11.27□□□□□ -0.61
CXCL12-202ENST00000374426 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 M0R1W7 72 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 KRT36O76013 467 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 GASTP01350 101 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 OPN1MWP04001 364 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 HSD11B1P28845 292 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 PRDX6P30041 224 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 GNALP38405 381 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF121P58317 390 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 MXRA7P84157 204 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ACSM1Q08AH1 577 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 EIF2B1Q14232 305 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms