RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NOP16Q9Y3C1 178 aaKnown RBP16.42■□□□□ 0.22
USP49-202ENST00000373010 ZNF716A6NP11 495 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 STMND1H3BQB6 276 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 SERPINA7P05543 415 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 JMJD7P0C870 316 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PPP3CBP16298 524 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 POU3F2P20265 443 aaPredicted RBP16.41■□□□□ 0.22
USP49-202ENST00000373010 MPZP25189 248 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 CD34P28906 385 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 THBS4P35443 961 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 P2RX3P56373 397 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PPP1R1AQ13522 171 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 LIN54Q6MZP7 749 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.41■□□□□ 0.22
USP49-202ENST00000373010 SLC25A42Q86VD7 318 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 OR10D3Q8NH80 312 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PSMF1Q92530 271 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 ALKBH3Q96Q83 286 aaPredicted RBP16.41■□□□□ 0.22
USP49-202ENST00000373010 KCNN3Q9UGI6 736 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 LNP1A1A4G5 178 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 C9orf172C9J069 976 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 CCSO14618 274 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 DNPH1O43598 174 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PATE4P0C8F1 98 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 ZNF24P17028 368 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 S100A11P31949 105 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PTGFRP43088 359 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 CYB561P49447 251 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 CLDN15P56746 228 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 ADAD2Q8NCV1 583 aaKnown RBP16.41■□□□□ 0.22
USP49-202ENST00000373010 OR4K15Q8NH41 348 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 PIGTQ969N2 578 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 FN3KRPQ9HA64 309 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 AUP1Q9Y679 476 aa16.41■□□□□ 0.22
USP49-202ENST00000373010 TRAV14DV4A0A0A6YYC5 116 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR6C65A6NJZ3 312 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 IFNA6P05013 189 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 GSTP1P09211 210 aaKnown RBP16.4■□□□□ 0.22
USP49-202ENST00000373010 ZNF883P0CG24 379 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 FCGR2AP12318 317 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 ZBTB25P24278 435 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 GDF1P27539 372 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 MICBQ29980 383 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 ZNF774Q6NX45 483 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 NAXDQ8IW45 347 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 PNLDC1Q8NA58 520 aaKnown RBP16.4■□□□□ 0.22
USP49-202ENST00000373010 SPTSSAQ969W0 71 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 THOC3Q96J01 351 aaKnown RBP16.4■□□□□ 0.22
USP49-202ENST00000373010 ARL6Q9H0F7 186 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 FOXJ2Q9P0K8 574 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 NCOR1O75376 2440 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 A0A1W2PNU3 283 aaPredicted RBP16.4■□□□□ 0.22
USP49-202ENST00000373010 HGFACQ04756 655 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 SPINK14Q6IE38 97 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 AAED1Q7RTV5 226 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR56B1Q8NGI3 324 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR51T1Q8NGJ9 327 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR2AE1Q8NHA4 323 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR2V1Q8NHB1 315 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 SGK3Q96BR1 496 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 ADGRG7Q96K78 797 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 OR10A2Q9H208 303 aa16.4■□□□□ 0.22
USP49-202ENST00000373010 SGCEO43556 437 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 SP9P0CG40 484 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 UBBP0CG47 229 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 B4GALT1P15291 398 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 PRSS12P56730 875 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 RAB14P61106 215 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 RPS27AP62979 156 aaKnown RBP16.39■□□□□ 0.21
USP49-202ENST00000373010 ZMYND11Q15326 602 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 CLVS2Q5SYC1 327 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 LYG2Q86SG7 212 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 COMMD7Q86VX2 200 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 ZDHHC22Q8N966 263 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 OR5M8Q8NGP6 311 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 ST8SIA4Q92187 359 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 ZNF845Q96IR2 970 aaPredicted RBP16.39■□□□□ 0.21
USP49-202ENST00000373010 URM1Q9BTM9 101 aaKnown RBP16.39■□□□□ 0.21
USP49-202ENST00000373010 GSX2Q9BZM3 304 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 SPRY4Q9C004 299 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 CHST5Q9GZS9 411 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 TMEM38BQ9NVV0 291 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 AHCTF1Q8WYP5 2266 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 MFNGO00587 321 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 SERPINA2P20848 420 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 CRYGSP22914 178 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 RGS19P49795 217 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 MARCH1Q8TCQ1 289 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 ZPBPQ9BS86 351 aa16.39■□□□□ 0.21
USP49-202ENST00000373010 C9orf170A2RU37 121 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 RFPL4AA6NLU0 287 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 RFPL4AL1F8VTS6 287 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 MGMTP16455 207 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 AKR1C4P17516 323 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 RFC3P40938 356 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 GMFBP60983 142 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 RAB35Q15286 201 aa16.38■□□□□ 0.21
USP49-202ENST00000373010 NHLRC3Q5JS37 347 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms