RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TERTO14746 1132 aaKnown RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 CEACAM5P06731 702 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 FGF7P21781 194 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 CCL4L1Q8NHW4 92 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 ERGIC1Q969X5 290 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 TECTBQ96PL2 329 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 CD300LDQ6UXZ3 194 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 MUC20Q8N307 709 aaPredicted RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 CCDC74AQ96AQ1 378 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 YTHDF2Q9Y5A9 579 aaKnown RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 NOVA1P51513 510 aaKnown RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 NTNG2Q96CW9 530 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 DHRS2Q13268 280 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 DUSP18Q8NEJ0 188 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 NARFLQ9H6Q4 476 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 TJP1Q07157 1748 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 EDARADDQ8WWZ3 215 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 COMMD5Q9GZQ3 224 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 FCER1GP30273 86 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 CCR5P51681 352 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 TTC9Q92623 222 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 UCK1Q9HA47 277 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 A0A1B0GUL6 1792 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 XKRY2A2RUG3 117 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 SLC31A2O15432 143 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
CHD4-201ENST00000357008 CST7O76096 145 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 IGHA2P01877 340 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 GP1BAP07359 652 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 GLB1P16278 677 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 FAHP16930 419 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 KRTDAPP60985 99 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 TMEM104Q8NE00 496 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 CXCL13O43927 109 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 TSEN54Q7Z6J9 526 aaKnown RBP13.36□□□□□ -0.27
CHD4-201ENST00000357008 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 SERTM1A2A2V5 107 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 PLRG1O43660 514 aaKnown RBP13.36□□□□□ -0.27
CHD4-201ENST00000357008 PPP1CBP62140 327 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
CHD4-201ENST00000357008 HMSDA8MTL9 139 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 NOXO1Q8NFA2 376 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 TMED3Q9Y3Q3 217 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 AGFG1P52594 562 aaKnown RBP13.35□□□□□ -0.27
CHD4-201ENST00000357008 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 ZFPL1O95159 310 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 PTHLHP12272 177 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 CLDN15P56746 228 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 WDR38Q5JTN6 314 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 C6orf15Q6UXA7 325 aaPredicted RBP13.35□□□□□ -0.27
CHD4-201ENST00000357008 OR10G3Q8NGC4 313 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 SPSB1Q96BD6 273 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 MMP25Q9NPA2 562 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 FBXO34Q9NWN3 711 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 TRAV20A0A0B4J274 112 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 ANKUB1A6NFN9 424 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 FUT3P21217 361 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 FOXF1Q12946 379 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 CPEB3Q8NE35 698 aaKnown RBP13.35□□□□□ -0.27
CHD4-201ENST00000357008 KTI12Q96EK9 354 aaPredicted RBP13.35□□□□□ -0.27
CHD4-201ENST00000357008 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 A0A096LPE4 126 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 A0A1W2PPZ6 126 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 H3BP45 60 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 SFT2D2O95562 160 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 M1APQ8TC57 530 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 OR5V1Q9UGF6 321 aa13.35□□□□□ -0.27
CHD4-201ENST00000357008 FABP4P15090 132 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 SNRPEP62304 92 aaKnown RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 IQCJQ1A5X6 159 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 TMEM272A0A1B0GTI8 110 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 NKX2-2O95096 273 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 ZNF17P17021 662 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 PPP2CBP62714 309 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 PPP2CAP67775 309 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 PPP1R1AQ13522 171 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 OR10D4PQ8NGN7 298 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 HLA-CQ95604 372 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 ADGRG7Q96K78 797 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 SERTM2A0A1B0GWG4 89 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 CLDN34H7C241 214 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 CCL11P51671 97 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 INSL4Q14641 139 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 COL13A1Q5TAT6 717 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms