RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 OR6C1Q96RD1 312 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 CMSS1Q9BQ75 279 aaKnown RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 IGKV1-9A0A0C4DH69 117 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 MED19A0JLT2 244 aaPredicted RBP17.52■□□□□ 0.4
CRLF3-201ENST00000324238 G3V3Y1 287 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 MASP2O00187 686 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 CSNK2A1P68400 391 aaPredicted RBP17.52■□□□□ 0.4
CRLF3-201ENST00000324238 PRAMEF20Q5VT98 475 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 OR2A2Q6IF42 318 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 CCDC36Q8IYA8 594 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 CSNK2A3Q8NEV1 391 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 MFSD8Q8NHS3 518 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 RTBDNQ9BSG5 229 aaPredicted RBP17.52■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF701Q9NV72 531 aaPredicted RBP17.52■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF581Q9P0T4 197 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 PI4KAP42356 2102 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 IGKV1D-8A0A087WSZ0 117 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 DBX1A6NMT0 343 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 C10orf142B7Z368 130 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 LRP3O75074 770 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 HEXBP07686 556 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 HIST1H1DP16402 221 aaKnown RBP17.52■□□□□ 0.4
CRLF3-201ENST00000324238 OR3A2P47893 321 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 TMEM128Q5BJH2 165 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 SVBPQ8N300 66 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 OR10Z1Q8NGY1 313 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 ASB13Q8WXK3 278 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 PTX4Q96A99 478 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 EHFQ9NZC4 300 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 GPR132Q9UNW8 380 aa17.52■□□□□ 0.4
CRLF3-201ENST00000324238 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 HLA-GP17693 338 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 SLC6A9P48067 706 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 KCNJ3P48549 501 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 LRRC18Q8N456 261 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 OR5H2Q8NGV7 314 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 PHYHIPLQ96FC7 376 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 PRELID3BQ9Y3B1 194 aa17.52■□□□□ 0.39
CRLF3-201ENST00000324238 IGHV3-15A0A0B4J1V0 119 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 TEX13DA0A0J9YY54 714 aaPredicted RBP17.51■□□□□ 0.39
CRLF3-201ENST00000324238 C17orf67Q0P5P2 114 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 MST1LQ2TV78 715 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 BRICD5Q6PL45 260 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 PIGTQ969N2 578 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 ZNF501Q96CX3 271 aaPredicted RBP17.51■□□□□ 0.39
CRLF3-201ENST00000324238 PPP4R1LQ9P1A2 415 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 FLVCR1Q9Y5Y0 555 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 CACNA1EQ15878 2313 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 ANKUB1A6NFN9 424 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 NDUFA2O43678 99 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 FAM157CP0CG43 387 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 CX3CR1P49238 355 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 SNU13P55769 128 aaKnown RBP17.51■□□□□ 0.39
CRLF3-201ENST00000324238 HFEQ30201 348 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 UEVLDQ8IX04 471 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 DDIT4LQ96D03 193 aa17.51■□□□□ 0.39
CRLF3-201ENST00000324238 QDPRP09417 244 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 MUC1P15941 1255 aaPredicted RBP17.5■□□□□ 0.39
CRLF3-201ENST00000324238 TMEM176BQ3YBM2 270 aaPredicted RBP17.5■□□□□ 0.39
CRLF3-201ENST00000324238 ARL11Q969Q4 196 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 CNTNAP3BQ96NU0 1288 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 C9JQL5 133 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 STMND1H3BQB6 276 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 OR2J2O76002 312 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 SRFP11831 508 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 BLVRBP30043 206 aaPredicted RBP17.5■□□□□ 0.39
CRLF3-201ENST00000324238 GABREP78334 506 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 RNF141Q8WVD5 230 aa17.5■□□□□ 0.39
CRLF3-201ENST00000324238 ESRP2Q9H6T0 727 aaKnown RBP17.5■□□□□ 0.39
CRLF3-201ENST00000324238 FGF16O43320 207 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 FOSL2P15408 326 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 FAHP16930 419 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 DEGS2Q6QHC5 323 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 D2HGDHQ8N465 521 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 POC1BQ8TC44 478 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 UQCC2Q9BRT2 126 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 METTL7AQ9H8H3 244 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 EML6Q6ZMW3 1958 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 A0A1B0GV50 99 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 SFT2D2O95562 160 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 SCGB1D2O95969 90 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 LPAR6P43657 344 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 RIPPLY1Q0D2K3 151 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 SMAD4Q13485 552 aaKnown RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 AADACL3Q5VUY0 350 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 ZNF574Q6ZN55 896 aaPredicted RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 BATF2Q8N1L9 274 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 DTWD2Q8NBA8 298 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 UQCC1Q9NVA1 299 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 ZNF107Q9UII5 783 aaPredicted RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 DBHP09172 617 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 GABRR1P24046 479 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 APOBEC1P41238 236 aaKnown RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 ZNF41P51814 821 aaPredicted RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 TGIF1Q15583 401 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 C6orf201Q7Z4U5 140 aa17.49■□□□□ 0.39
CRLF3-201ENST00000324238 C17orf82Q86X59 251 aaPredicted RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 MRPL13Q9BYD1 178 aaKnown RBP17.49■□□□□ 0.39
CRLF3-201ENST00000324238 SHANK1Q9Y566 2161 aa17.48■□□□□ 0.39
CRLF3-201ENST00000324238 ZNF878C9JN71 531 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms