RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 XRCC2O43543 280 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 ICAM2P13598 275 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 MSX1P28360 303 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC35A1P78382 337 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 PTX4Q96A99 478 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 ZNF775Q96BV0 537 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 LRRC61Q9BV99 259 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 KLHL13Q9P2N7 655 aa11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 MDC1Q14676 2089 aaKnown RBP11.37□□□□□ -0.59
DNMT3A-202ENST00000321117 CEP290O15078 2479 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR6C76A6NM76 312 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR2C1O95371 312 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 GLAP06280 429 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 GABRG2P18507 467 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 FSTP19883 344 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 EPHA1P21709 976 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 S100PP25815 95 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 CDAP32320 146 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 NDUFA6P56556 154 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 DEFA6Q01524 100 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 RNF212Q495C1 297 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 EIF4E3Q8N5X7 224 aaKnown RBP11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 ARHGEF17Q96PE2 2063 aaPredicted RBP11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 IGHV5-51A0A0C4DH38 117 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 IFNA1P01562 189 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 CD8AP01732 235 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 CCR5P51681 352 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 FZD5Q13467 585 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 PLPP5Q8NEB5 264 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 WNT2BQ93097 391 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 UNC13CQ8NB66 2214 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 SERPINE3A8MV23 424 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 SOCS1O15524 211 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 CALCRP30988 508 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 TAGLN2P37802 199 aaKnown RBP11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR3A4PP47883 348 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 NAAAQ02083 359 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 ROM1Q03395 351 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 TAF9Q16594 264 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 GUK1Q16774 197 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 MICBQ29980 383 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 MIDNQ504T8 468 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR2G3Q8NGZ4 309 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 OR14L1PQ8NHC6 308 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 NELFAQ9H3P2 528 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 GHRLQ9UBU3 117 aa11.36□□□□□ -0.59
DNMT3A-202ENST00000321117 ABHD16AO95870 558 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 DBHP09172 617 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 DUSP1P28562 367 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 PIGPP57054 158 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 FZD2Q14332 565 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 KIF26BQ2KJY2 2108 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 HIST2H3AQ71DI3 136 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 PIGCQ92535 297 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 MR1Q95460 341 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 NIPSNAP3BQ9BS92 247 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 REG4Q9BYZ8 158 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 FBXL17Q9UF56 701 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 URGCP-MRPS24S4R325 110 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 MSTNO14793 375 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 CDC14BO60729 498 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 TK1P04183 234 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SERPINE2P07093 398 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 NQO2P16083 231 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 ALDH3B1P43353 468 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 GSK3AP49840 483 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC16A13Q7RTY0 426 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 CPEB2Q7Z5Q1 589 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 STT3BQ8TCJ2 826 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SECTM1Q8WVN6 248 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 PAPOLGQ9BWT3 736 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 GPR173Q9NS66 373 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 STRAPQ9Y3F4 350 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 TDRD6O60522 2096 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SHISA8B8ZZ34 492 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 EFSO43281 561 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 MT-ND4LP03901 98 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 MMP16P51512 607 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 RNF4P78317 190 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 NR0B2Q15466 257 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 GAB4Q2WGN9 574 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 PLCXD3Q63HM9 321 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC26A10Q8NG04 563 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 RTN4IP1Q8WWV3 396 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 HAS2Q92819 552 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 KCNK7Q9Y2U2 307 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 TRAV20A0A0B4J274 112 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 A0A1W2PPC4 97 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 ANKUB1A6NFN9 424 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 LILRA5A6NI73 299 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms