RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 St8sia1Q64687 355 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Glt8d1Q6NSU3 371 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Endod1Q8C522 501 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dync2li1Q8K0T2 351 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mmd2Q8R189 247 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1501Q8VFQ3 315 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr531Q8VGL2 304 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Odf4Q8VI88 290 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Snapc3Q9D2C9 407 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr547E9PXN3 311 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 LplP11152 474 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Hnf1aP22361 628 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gpr55Q3UJF0 327 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp872Q3UVL3 465 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Wfdc5Q4KXB6 126 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Q8C4X7 151 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Plcxd1Q8CHS4 345 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1424Q8VFV1 313 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Efcab10Q9D581 132 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Col11a1Q61245 1804 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Igkv10-95A0A0G2JFY3 115 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tgfbr3lD3YZZ2 297 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn1r159K7N701 305 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dll3O88516 592 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Drd3P30728 446 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 P2rx1P51576 399 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fkbp14P59024 211 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nme2Q01768 152 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Morn4Q6PGF2 146 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1126Q7TR49 314 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Adarb1Q91ZS8 711 aaKnown RBP14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ighv6-6A0A075B5T3 119 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm5678A0A1B0GRG8 277 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 FcmrA1KXC4 422 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Hoxd9P28357 339 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ube2kP61087 200 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp933Q6PEE4 468 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp748Q7TPL6 888 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Marveld1Q7TQJ1 173 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rspry1Q8BVR6 576 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp286Q8C0E6 519 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cmtm4Q8CJ61 208 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Elf5Q8VDK3 253 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 HypmQ9CR04 117 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 TollipQ9QZ06 274 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rdh16f1E9Q9P8 317 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lipo5F6QKH6 233 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm8265K7N6Y8 158 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 AipO08915 330 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 EhfO70273 300 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fzd8Q61091 685 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Znf629Q6A085 867 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pik3ip1Q7TMJ8 264 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr775Q7TRI4 312 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr517Q7TRU4 314 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lix1lQ8BQ89 337 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pomt1Q8R2R1 746 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr434Q8VF17 321 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr47Q8VF18 321 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1261Q8VFB0 306 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pycr3Q9DCC4 274 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 LipgQ9WVG5 500 aa14.11□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 4930467E23RikD3Z1P8 350 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm15319E9Q637 350 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr746E9Q840 314 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zp3P10761 424 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Crybb2P62696 205 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ext1P97464 746 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pitx2P97474 317 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 VegfdP97946 358 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ltc4sQ60860 150 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1500Q7TQQ3 311 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1472Q7TQQ9 314 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm21119Q8C646 350 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SrrdQ8K2M3 249 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 MepeQ8K4L6 441 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Prss42Q8VIF2 335 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr713Q920G5 324 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 PsenenQ9CQR7 101 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Alkbh4Q9D8F1 300 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dctn6Q9WUB4 190 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Oosp3G5E8D7 195 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nme1P15532 152 aaKnown RBP14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Klk1b5P15945 261 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fcer1gP20491 86 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 ArntP53762 791 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Znf488Q5HZG9 337 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dtx4Q6PDK8 616 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Elfn1Q8C8T7 828 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc25a45Q8CFJ7 288 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Steap4Q923B6 470 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Plekhb1Q9QYE9 243 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp236S4R299 1847 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr544E9PX47 334 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Eif1P48024 113 aaKnown RBP14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fgf9P54130 208 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 CtseP70269 397 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Smad4P97471 551 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr9Q60885 312 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr487Q7TRU9 314 aa14.1□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms