RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C PHO12P38693 467 aa3.87□□□□□ -1.79
SNU56YDR240C SFB3P38810 929 aa3.87□□□□□ -1.79
SNU56YDR240C CCT7P42943 550 aaKnown RBP3.87□□□□□ -1.79
SNU56YDR240C CTR1P49573 406 aa3.87□□□□□ -1.79
SNU56YDR240C ATG4P53867 494 aa3.87□□□□□ -1.79
SNU56YDR240C RPN13O13563 156 aa3.86□□□□□ -1.79
SNU56YDR240C TUB1P09733 447 aaKnown RBP3.86□□□□□ -1.79
SNU56YDR240C PCL2P25693 308 aa3.86□□□□□ -1.79
SNU56YDR240C CRP1P38845 465 aaKnown RBP3.86□□□□□ -1.79
SNU56YDR240C HRB1P38922 454 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SNU56YDR240C GET2P40056 285 aa3.86□□□□□ -1.79
SNU56YDR240C APM1Q00776 475 aaPredicted RBP3.86□□□□□ -1.79
SNU56YDR240C RAD18P10862 487 aa3.86□□□□□ -1.79
SNU56YDR240C ERG6P25087 383 aaKnown RBP3.86□□□□□ -1.79
SNU56YDR240C ADY2P25613 283 aa3.86□□□□□ -1.79
SNU56YDR240C PPZ2P33329 710 aa3.86□□□□□ -1.79
SNU56YDR240C APN2P38207 520 aa3.86□□□□□ -1.79
SNU56YDR240C SET2P46995 733 aaKnown RBP3.86□□□□□ -1.79
SNU56YDR240C ARP4P80428 489 aa3.86□□□□□ -1.79
SNU56YDR240C ATG33Q06485 197 aa3.86□□□□□ -1.79
SNU56YDR240C NTG2Q08214 380 aa3.86□□□□□ -1.79
SNU56YDR240C DIA2Q08496 732 aaPredicted RBP3.86□□□□□ -1.79
SNU56YDR240C ZRT2Q12436 422 aa3.86□□□□□ -1.79
SNU56YDR240C PCM1P38628 557 aaKnown RBP3.85□□□□□ -1.79
SNU56YDR240C SSZ1P38788 538 aaKnown RBP3.85□□□□□ -1.79
SNU56YDR240C NOP9P47077 666 aaKnown RBP3.85□□□□□ -1.79
SNU56YDR240C YJR039WP47107 1121 aa3.85□□□□□ -1.79
SNU56YDR240C UBC9P50623 157 aaPredicted RBP3.85□□□□□ -1.79
SNU56YDR240C COQ11Q05892 277 aa3.85□□□□□ -1.79
SNU56YDR240C BNR1P40450 1375 aa3.84□□□□□ -1.79
SNU56YDR240C HMG1P12683 1054 aa3.84□□□□□ -1.8
SNU56YDR240C THR1P17423 357 aaKnown RBP3.84□□□□□ -1.8
SNU56YDR240C SFL1P20134 766 aa3.84□□□□□ -1.8
SNU56YDR240C PRP28P23394 588 aa3.84□□□□□ -1.8
SNU56YDR240C CCR4P31384 837 aaKnown RBP3.84□□□□□ -1.8
SNU56YDR240C RRP14P36080 434 aaKnown RBP3.84□□□□□ -1.8
SNU56YDR240C RIX1P38883 763 aaPredicted RBP3.84□□□□□ -1.8
SNU56YDR240C IMO32P53219 342 aa3.84□□□□□ -1.8
SNU56YDR240C ARO10Q06408 635 aa3.84□□□□□ -1.8
SNU56YDR240C THI22Q06490 572 aa3.84□□□□□ -1.8
SNU56YDR240C MLH3Q12083 715 aa3.84□□□□□ -1.8
SNU56YDR240C GIN4Q12263 1142 aa3.84□□□□□ -1.8
SNU56YDR240C SPO11P23179 398 aa3.83□□□□□ -1.8
SNU56YDR240C SEC6P32844 805 aa3.83□□□□□ -1.8
SNU56YDR240C UBS1P38290 277 aa3.83□□□□□ -1.8
SNU56YDR240C BIT2P38346 545 aa3.83□□□□□ -1.8
SNU56YDR240C YEL020CP39994 560 aa3.83□□□□□ -1.8
SNU56YDR240C PIG2P40187 538 aa3.83□□□□□ -1.8
SNU56YDR240C RSC8P43609 557 aaKnown RBP3.83□□□□□ -1.8
SNU56YDR240C BRE5P53741 515 aaKnown RBP3.83□□□□□ -1.8
SNU56YDR240C GPD1Q00055 391 aaKnown RBP3.83□□□□□ -1.8
SNU56YDR240C YLR001CQ07895 862 aa3.83□□□□□ -1.8
SNU56YDR240C YNL162W-AQ3E7A8 72 aa3.83□□□□□ -1.8
SNU56YDR240C ABF1P14164 731 aa3.82□□□□□ -1.8
SNU56YDR240C MNN4P36044 1178 aa3.82□□□□□ -1.8
SNU56YDR240C COX18P53239 316 aa3.82□□□□□ -1.8
SNU56YDR240C BCS1P32839 456 aa3.81□□□□□ -1.8
SNU56YDR240C GMH1P36125 273 aa3.81□□□□□ -1.8
SNU56YDR240C AKL1P38080 1108 aaKnown RBP3.81□□□□□ -1.8
SNU56YDR240C MAL31P38156 614 aa3.81□□□□□ -1.8
SNU56YDR240C MRK1P50873 501 aa3.81□□□□□ -1.8
SNU56YDR240C AIM14P53109 570 aa3.81□□□□□ -1.8
SNU56YDR240C LEE1Q02799 301 aaKnown RBP3.81□□□□□ -1.8
SNU56YDR240C RGC1Q06108 1083 aaKnown RBP3.81□□□□□ -1.8
SNU56YDR240C BMS1Q08965 1183 aaKnown RBP3.81□□□□□ -1.8
SNU56YDR240C DCS2Q12123 353 aa3.81□□□□□ -1.8
SNU56YDR240C USV1Q12132 391 aa3.81□□□□□ -1.8
SNU56YDR240C ECM3Q99252 613 aa3.81□□□□□ -1.8
SNU56YDR240C ERG20P08524 352 aaKnown RBP3.8□□□□□ -1.8
SNU56YDR240C FUB1P25659 250 aa3.8□□□□□ -1.8
SNU56YDR240C EMP70P32802 667 aa3.8□□□□□ -1.8
SNU56YDR240C MUP3P38734 546 aa3.8□□□□□ -1.8
SNU56YDR240C CHS5Q12114 671 aaKnown RBP3.8□□□□□ -1.8
SNU56YDR240C KCC4P25389 1037 aa3.79□□□□□ -1.8
SNU56YDR240C SET3P36124 751 aa3.79□□□□□ -1.8
SNU56YDR240C FLO10P36170 1169 aa3.79□□□□□ -1.8
SNU56YDR240C BEM4P39011 633 aa3.79□□□□□ -1.8
SNU56YDR240C PAC2P39937 518 aa3.79□□□□□ -1.8
SNU56YDR240C YGR151CP53287 111 aa3.79□□□□□ -1.8
SNU56YDR240C YNL193WP53870 558 aa3.79□□□□□ -1.8
SNU56YDR240C TFB2Q02939 513 aa3.79□□□□□ -1.8
SNU56YDR240C GUD1Q07729 489 aa3.79□□□□□ -1.8
SNU56YDR240C POM34Q12445 299 aa3.79□□□□□ -1.8
SNU56YDR240C NTH1P32356 751 aa3.79□□□□□ -1.8
SNU56YDR240C PET127P32606 800 aa3.79□□□□□ -1.8
SNU56YDR240C PEX2P32800 271 aa3.79□□□□□ -1.8
SNU56YDR240C YKR075CP36155 307 aa3.79□□□□□ -1.8
SNU56YDR240C YHR202WP38887 602 aa3.79□□□□□ -1.8
SNU56YDR240C MGS1P40151 587 aa3.79□□□□□ -1.8
SNU56YDR240C ISA1Q07821 250 aaPredicted RBP3.79□□□□□ -1.8
SNU56YDR240C KIN82P25341 720 aa3.78□□□□□ -1.8
SNU56YDR240C FEN2P25621 512 aaKnown RBP3.78□□□□□ -1.8
SNU56YDR240C YPT7P32939 208 aa3.78□□□□□ -1.8
SNU56YDR240C CTP1P38152 299 aa3.78□□□□□ -1.8
SNU56YDR240C YNL195CP40168 261 aa3.78□□□□□ -1.8
SNU56YDR240C MET13P53128 600 aa3.78□□□□□ -1.8
SNU56YDR240C ALG12P53730 551 aa3.78□□□□□ -1.8
SNU56YDR240C VHS3Q08438 674 aa3.78□□□□□ -1.8
SNU56YDR240C SEC15P22224 910 aa3.77□□□□□ -1.81
SNU56YDR240C NUG1P40010 520 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms