RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W STL1P39932 569 aa6.14□□□□□ -1.43
VMS1YDR049W CAF16P43569 289 aa6.14□□□□□ -1.43
VMS1YDR049W YGR266WP53326 701 aa6.14□□□□□ -1.43
VMS1YDR049W YNR068CP53754 272 aa6.14□□□□□ -1.43
VMS1YDR049W MRPL13Q02204 264 aa6.14□□□□□ -1.43
VMS1YDR049W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VMS1YDR049W YPL066WQ12194 479 aa6.14□□□□□ -1.43
VMS1YDR049W YLL054CQ12244 843 aa6.14□□□□□ -1.43
VMS1YDR049W SSN2P38931 1420 aa6.14□□□□□ -1.43
VMS1YDR049W COBP00163 385 aa6.13□□□□□ -1.43
VMS1YDR049W LEU2P04173 364 aaPredicted RBP6.13□□□□□ -1.43
VMS1YDR049W TRK1P12685 1235 aa6.13□□□□□ -1.43
VMS1YDR049W OLE1P21147 510 aaKnown RBP6.13□□□□□ -1.43
VMS1YDR049W MSN1P22148 382 aa6.13□□□□□ -1.43
VMS1YDR049W SGF29P25554 259 aa6.13□□□□□ -1.43
VMS1YDR049W NUD1P32336 851 aa6.13□□□□□ -1.43
VMS1YDR049W SER1P33330 395 aaKnown RBP6.13□□□□□ -1.43
VMS1YDR049W LOT5P34234 306 aa6.13□□□□□ -1.43
VMS1YDR049W YKL107WP34251 309 aa6.13□□□□□ -1.43
VMS1YDR049W SWH1P35845 1188 aa6.13□□□□□ -1.43
VMS1YDR049W DED81P38707 554 aaKnown RBP6.13□□□□□ -1.43
VMS1YDR049W YER010CP40011 234 aa6.13□□□□□ -1.43
VMS1YDR049W YGL176CP46945 554 aa6.13□□□□□ -1.43
VMS1YDR049W NOP9P47077 666 aaKnown RBP6.13□□□□□ -1.43
VMS1YDR049W PNG1Q02890 363 aa6.13□□□□□ -1.43
VMS1YDR049W SKS1Q12505 502 aa6.13□□□□□ -1.43
VMS1YDR049W LAM1P38851 1228 aa6.13□□□□□ -1.43
VMS1YDR049W NAS2P40555 220 aa6.13□□□□□ -1.43
VMS1YDR049W RPN14P53196 417 aa6.13□□□□□ -1.43
VMS1YDR049W MSH6Q03834 1242 aa6.13□□□□□ -1.43
VMS1YDR049W ATG33Q06485 197 aa6.13□□□□□ -1.43
VMS1YDR049W RTN2Q12443 393 aa6.13□□□□□ -1.43
VMS1YDR049W ARG3P05150 338 aa6.12□□□□□ -1.43
VMS1YDR049W PDC1P06169 563 aaKnown RBP6.12□□□□□ -1.43
VMS1YDR049W FUM1P08417 488 aaKnown RBP6.12□□□□□ -1.43
VMS1YDR049W HEM13P11353 328 aaKnown RBP6.12□□□□□ -1.43
VMS1YDR049W AMS1P22855 1083 aa6.12□□□□□ -1.43
VMS1YDR049W YCL049CP25577 312 aa6.12□□□□□ -1.43
VMS1YDR049W GYP6P32806 458 aa6.12□□□□□ -1.43
VMS1YDR049W MTG2P38860 518 aa6.12□□□□□ -1.43
VMS1YDR049W OSW5P40219 148 aa6.12□□□□□ -1.43
VMS1YDR049W YNR061CP53747 219 aa6.12□□□□□ -1.43
VMS1YDR049W SFB2P53953 876 aa6.12□□□□□ -1.43
VMS1YDR049W OAZ1Q02803 292 aa6.12□□□□□ -1.43
VMS1YDR049W TIF35Q04067 274 aaKnown RBP6.12□□□□□ -1.43
VMS1YDR049W RBA50Q04418 439 aa6.12□□□□□ -1.43
VMS1YDR049W YDR338CQ05497 695 aa6.12□□□□□ -1.43
VMS1YDR049W TRM8Q12009 286 aa6.12□□□□□ -1.43
VMS1YDR049W HAL9Q12180 1030 aa6.12□□□□□ -1.43
VMS1YDR049W MDY2Q12285 212 aa6.12□□□□□ -1.43
VMS1YDR049W YPR071WQ12346 211 aa6.12□□□□□ -1.43
VMS1YDR049W MGM1P32266 881 aa6.11□□□□□ -1.43
VMS1YDR049W WHI3P34761 661 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W SIF2P38262 535 aa6.11□□□□□ -1.43
VMS1YDR049W UTP9P38882 575 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W ALD5P40047 520 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W NEO1P40527 1151 aa6.11□□□□□ -1.43
VMS1YDR049W CPR6P53691 371 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W EOS1P53938 366 aa6.11□□□□□ -1.43
VMS1YDR049W ADE13Q05911 482 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W PMT7Q06644 662 aa6.11□□□□□ -1.43
VMS1YDR049W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VMS1YDR049W MON2P48563 1636 aaPredicted RBP6.11□□□□□ -1.43
VMS1YDR049W RPS21AP0C0V8 87 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W HMG1P12683 1054 aa6.11□□□□□ -1.43
VMS1YDR049W POL3P15436 1097 aa6.11□□□□□ -1.43
VMS1YDR049W DBP3P20447 523 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W HOG1P32485 435 aa6.11□□□□□ -1.43
VMS1YDR049W UTR2P32623 467 aa6.11□□□□□ -1.43
VMS1YDR049W SFA1P32771 386 aa6.11□□□□□ -1.43
VMS1YDR049W SLA1P32790 1244 aa6.11□□□□□ -1.43
VMS1YDR049W MRP4P32902 394 aa6.11□□□□□ -1.43
VMS1YDR049W DUR3P33413 735 aa6.11□□□□□ -1.43
VMS1YDR049W RMA1P36001 430 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W YKT6P36015 200 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W POL12P38121 705 aaPredicted RBP6.11□□□□□ -1.43
VMS1YDR049W PCH2P38126 564 aa6.11□□□□□ -1.43
VMS1YDR049W DYS1P38791 387 aa6.11□□□□□ -1.43
VMS1YDR049W YJL070CP40361 888 aa6.11□□□□□ -1.43
VMS1YDR049W YJR039WP47107 1121 aa6.11□□□□□ -1.43
VMS1YDR049W SHE4P51534 789 aa6.11□□□□□ -1.43
VMS1YDR049W TAD1P53065 400 aa6.11□□□□□ -1.43
VMS1YDR049W SGF73P53165 657 aa6.11□□□□□ -1.43
VMS1YDR049W TOF1P53840 1238 aa6.11□□□□□ -1.43
VMS1YDR049W RSF1Q05043 376 aa6.11□□□□□ -1.43
VMS1YDR049W NOP6Q07623 225 aaKnown RBP6.11□□□□□ -1.43
VMS1YDR049W NUC1P08466 329 aa6.1□□□□□ -1.43
VMS1YDR049W NCP1P16603 691 aaKnown RBP6.1□□□□□ -1.43
VMS1YDR049W HCA4P20448 770 aaKnown RBP6.1□□□□□ -1.43
VMS1YDR049W GRR1P24814 1151 aa6.1□□□□□ -1.43
VMS1YDR049W ADK2P26364 225 aa6.1□□□□□ -1.43
VMS1YDR049W SPC110P32380 944 aa6.1□□□□□ -1.43
VMS1YDR049W APM3P38153 483 aa6.1□□□□□ -1.43
VMS1YDR049W HXT6P39003 570 aaKnown RBP6.1□□□□□ -1.43
VMS1YDR049W HXT7P39004 570 aa6.1□□□□□ -1.43
VMS1YDR049W LYS14P40971 790 aa6.1□□□□□ -1.43
VMS1YDR049W STU2P46675 888 aa6.1□□□□□ -1.43
VMS1YDR049W NCS6P53088 359 aa6.1□□□□□ -1.43
VMS1YDR049W DSL1P53847 754 aa6.1□□□□□ -1.43
VMS1YDR049W JJJ1P53863 590 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms