RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	LCD1	Q04377	747 aa		5.99	□□□□□ -1.45
ROX3	YBL093C	OPI10	Q08202	246 aa		5.99	□□□□□ -1.45
ROX3	YBL093C	CEX1	Q12453	761 aa		5.99	□□□□□ -1.45
ROX3	YBL093C	DFG16	Q99234	619 aa		5.99	□□□□□ -1.45
ROX3	YBL093C	CIT1	P00890	479 aa		5.98	□□□□□ -1.45
ROX3	YBL093C	SAM2	P19358	384 aa	Known RBP	5.98	□□□□□ -1.45
ROX3	YBL093C	PRI2	P20457	528 aa		5.98	□□□□□ -1.45
ROX3	YBL093C	CCT3	P39077	534 aa	Known RBP	5.98	□□□□□ -1.45
ROX3	YBL093C	TIF4631	P39935	952 aa	Known RBP	5.98	□□□□□ -1.45
ROX3	YBL093C	CSR2	Q12734	1121 aa		5.98	□□□□□ -1.45
ROX3	YBL093C	THS1	P04801	734 aa	Known RBP	5.97	□□□□□ -1.45
ROX3	YBL093C	RPL11A	P0C0W9	174 aa	Known RBP	5.97	□□□□□ -1.45
ROX3	YBL093C	ALG1	P16661	449 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	ABD1	P32783	436 aa	Predicted RBP	5.97	□□□□□ -1.45
ROX3	YBL093C	LRG1	P35688	1017 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	YKT6	P36015	200 aa	Known RBP	5.97	□□□□□ -1.45
ROX3	YBL093C	VPS45	P38932	577 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	GEM1	P39722	662 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	MXR1	P40029	184 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	LYS14	P40971	790 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	ECL1	P48235	211 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	ASE1	P50275	885 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	RET3	P53600	189 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	SSL2	Q00578	843 aa		5.97	□□□□□ -1.45
ROX3	YBL093C	RPL11B	Q3E757	174 aa	Predicted RBP	5.97	□□□□□ -1.45
ROX3	YBL093C	RPL22A	P05749	121 aa	Known RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	AGP1	P25376	633 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	SBA1	P28707	216 aa	Known RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	BMH1	P29311	267 aa	Known RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	SRP40	P32583	406 aa	Predicted RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	PNT1	P38969	423 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	STT3	P39007	718 aa	Known RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	YFL054C	P43549	646 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	EIS1	Q05050	843 aa	Known RBP	5.96	□□□□□ -1.46
ROX3	YBL093C	SGD1	Q06132	899 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	MMR1	Q06324	491 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	ESC2	Q06340	456 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	SUE1	Q06524	206 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	ACM1	Q08981	209 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	YPL066W	Q12194	479 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	TIP41	Q12199	356 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	NBL1	Q3E7Y6	73 aa		5.96	□□□□□ -1.46
ROX3	YBL093C	KRS1	P15180	591 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	THR4	P16120	514 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	DBP2	P24783	546 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	GSY2	P27472	705 aa		5.95	□□□□□ -1.46
ROX3	YBL093C	SEC26	P41810	973 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	AVT1	P47082	602 aa		5.95	□□□□□ -1.46
ROX3	YBL093C	ENV11	P53246	860 aa		5.95	□□□□□ -1.46
ROX3	YBL093C	VMS1	Q04311	632 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	VIP1	Q06685	1146 aa	Known RBP	5.95	□□□□□ -1.46
ROX3	YBL093C	MPE1	P35728	441 aa	Known RBP	5.94	□□□□□ -1.46
ROX3	YBL093C	MRPL10	P36520	322 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	ACA1	P39970	489 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	PEA2	P40091	420 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	YGR153W	P48238	217 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	SOL4	P53315	255 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	RTC4	P53850	401 aa		5.94	□□□□□ -1.46
ROX3	YBL093C	SMD2	Q06217	110 aa	Known RBP	5.94	□□□□□ -1.46
ROX3	YBL093C	SLK19	Q08581	821 aa	Known RBP	5.94	□□□□□ -1.46
ROX3	YBL093C	HIR1	P32479	840 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	SEG2	P34250	1132 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	ETP1	P38748	585 aa	Known RBP	5.93	□□□□□ -1.46
ROX3	YBL093C	NDT80	P38830	627 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	TPM2	P40414	161 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	THI6	P41835	540 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	LSB1	P53281	241 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	BNI5	P53890	448 aa	Known RBP	5.93	□□□□□ -1.46
ROX3	YBL093C	SHE9	Q04172	456 aa		5.93	□□□□□ -1.46
ROX3	YBL093C	TDA5	Q06417	326 aa	Known RBP	5.93	□□□□□ -1.46
ROX3	YBL093C	HIS4	P00815	799 aa	Known RBP	5.92	□□□□□ -1.46
ROX3	YBL093C	RPL8A	P17076	256 aa	Known RBP	5.92	□□□□□ -1.46
ROX3	YBL093C	SAS3	P34218	831 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	YKL069W	P36088	180 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	VBA5	P36172	582 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	PSY4	P38193	441 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	SIP5	P40210	489 aa	Known RBP	5.92	□□□□□ -1.46
ROX3	YBL093C	YML037C	Q03703	340 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	SVS1	Q12254	260 aa		5.92	□□□□□ -1.46
ROX3	YBL093C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
ROX3	YBL093C	FBP1	P09201	348 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	RAD18	P10862	487 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	MRP8	P35719	219 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	MIC60	P36112	540 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	PHO88	P38264	188 aa	Predicted RBP	5.91	□□□□□ -1.46
ROX3	YBL093C	GAA1	P39012	614 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	MBP1	P39678	833 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	FMS1	P50264	508 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	WAR1	Q03631	944 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	RSM24	Q03976	319 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	TMA64	Q04600	565 aa	Known RBP	5.91	□□□□□ -1.46
ROX3	YBL093C	CSM3	Q04659	317 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	YOR352W	Q08816	343 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	GIN4	Q12263	1142 aa		5.91	□□□□□ -1.46
ROX3	YBL093C	ECM29	P38737	1868 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	FOB1	O13329	566 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	TUF1	P02992	437 aa	Known RBP	5.9	□□□□□ -1.46
ROX3	YBL093C	SAC6	P32599	642 aa	Known RBP	5.9	□□□□□ -1.46
ROX3	YBL093C	SLA2	P33338	968 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	TGL1	P34163	548 aa		5.9	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms