RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 NLGN1Q8N2Q7 840 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 TBC1D2Q9BYX2 928 aa21.28■■□□□ 1
PHGDH-232ENST00000641947 CACNA1SQ13698 1873 aa21.27■■□□□ 1
PHGDH-232ENST00000641947 ZNF589Q86UQ0 364 aaPredicted RBP21.27■■□□□ 1
PHGDH-232ENST00000641947 RUFY2Q8WXA3 655 aa21.27■■□□□ 1
PHGDH-232ENST00000641947 LRRC37AA6NMS7 1700 aa21.26■□□□□ 0.99
PHGDH-232ENST00000641947 CD2BP2O95400 341 aaKnown RBP21.25■□□□□ 0.99
PHGDH-232ENST00000641947 GRAPQ13588 217 aa21.25■□□□□ 0.99
PHGDH-232ENST00000641947 GRAPLQ8TC17 118 aaPredicted RBP21.25■□□□□ 0.99
PHGDH-232ENST00000641947 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
PHGDH-232ENST00000641947 MMP10P09238 476 aa21.25■□□□□ 0.99
PHGDH-232ENST00000641947 BCAMP50895 628 aa21.25■□□□□ 0.99
PHGDH-232ENST00000641947 CYP2E1P05181 493 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-232ENST00000641947 LTBP1Q14766 1721 aa21.24■□□□□ 0.99
PHGDH-232ENST00000641947 COL1A1P02452 1464 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-232ENST00000641947 CCDC171Q6TFL3 1326 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-232ENST00000641947 EPB41L2O43491 1005 aaKnown RBP21.23■□□□□ 0.99
PHGDH-232ENST00000641947 KLRK1P26718 216 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 HSPA4P34932 840 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 BAG6P46379 1132 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 RASGRF1Q13972 1273 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 CCDC129Q6ZRS4 1044 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 STK32BQ9NY57 414 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 HMG20BQ9P0W2 317 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 UBE4AQ14139 1066 aa21.23■□□□□ 0.99
PHGDH-232ENST00000641947 PDGFDQ9GZP0 370 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-232ENST00000641947 PIH1D3Q9NQM4 214 aaKnown RBP21.23■□□□□ 0.99
PHGDH-232ENST00000641947 ZNF804BA4D1E1 1349 aa21.22■□□□□ 0.99
PHGDH-232ENST00000641947 UQCRFS1P1P0C7P4 283 aa21.22■□□□□ 0.99
PHGDH-232ENST00000641947 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
PHGDH-232ENST00000641947 GYG1P46976 350 aa21.21■□□□□ 0.99
PHGDH-232ENST00000641947 SF3B2Q13435 895 aaKnown RBP21.21■□□□□ 0.99
PHGDH-232ENST00000641947 IL17RAQ96F46 866 aa21.21■□□□□ 0.99
PHGDH-232ENST00000641947 IRS2Q9Y4H2 1338 aa21.21■□□□□ 0.99
PHGDH-232ENST00000641947 RNF113AO15541 343 aaKnown RBP21.2■□□□□ 0.99
PHGDH-232ENST00000641947 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.99
PHGDH-232ENST00000641947 BECN1Q14457 450 aa21.2■□□□□ 0.99
PHGDH-232ENST00000641947 RABEP1Q15276 862 aa21.2■□□□□ 0.99
PHGDH-232ENST00000641947 ZMYM1Q5SVZ6 1142 aa21.2■□□□□ 0.99
PHGDH-232ENST00000641947 KIAA1211Q6ZU35 1233 aa21.2■□□□□ 0.99
PHGDH-232ENST00000641947 SNX21Q969T3 373 aa21.2■□□□□ 0.99
PHGDH-232ENST00000641947 RASEFQ8IZ41 740 aa21.2■□□□□ 0.98
PHGDH-232ENST00000641947 SPATA5Q8NB90 893 aa21.2■□□□□ 0.98
PHGDH-232ENST00000641947 MAST3O60307 1309 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 MCCP23508 829 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 ILDR1Q86SU0 546 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-232ENST00000641947 MAP4K1Q92918 833 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 BRIP1Q9BX63 1249 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
PHGDH-232ENST00000641947 M0R2C6 588 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 ANAPC15P60006 121 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 TICAM2Q86XR7 235 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 RBM17Q96I25 401 aaKnown RBP21.18■□□□□ 0.98
PHGDH-232ENST00000641947 FAM84BQ96KN1 310 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-232ENST00000641947 IQSEC3Q9UPP2 1182 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-232ENST00000641947 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 RBM8AQ9Y5S9 174 aaKnown RBP21.18■□□□□ 0.98
PHGDH-232ENST00000641947 SNX14Q9Y5W7 946 aa21.18■□□□□ 0.98
PHGDH-232ENST00000641947 NECTIN1Q15223 517 aa21.17■□□□□ 0.98
PHGDH-232ENST00000641947 TXNRD3Q86VQ6 643 aa21.17■□□□□ 0.98
PHGDH-232ENST00000641947 LAMA4Q16363 1823 aa21.16■□□□□ 0.98
PHGDH-232ENST00000641947 PRPF40BQ6NWY9 871 aaKnown RBP21.16■□□□□ 0.98
PHGDH-232ENST00000641947 KCNB2Q92953 911 aa21.16■□□□□ 0.98
PHGDH-232ENST00000641947 CRAMP1Q96RY5 1269 aa21.16■□□□□ 0.98
PHGDH-232ENST00000641947 DAXXQ9UER7 740 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-232ENST00000641947 WWC3Q9ULE0 1092 aa21.16■□□□□ 0.98
PHGDH-232ENST00000641947 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
PHGDH-232ENST00000641947 SRGNP10124 158 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 VPS53Q5VIR6 699 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 FBXO33Q7Z6M2 555 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 HSCBQ8IWL3 235 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 KCNJ4P48050 445 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 GPSM2P81274 684 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 TTF1Q15361 905 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-232ENST00000641947 TAF6LQ9Y6J9 622 aa21.15■□□□□ 0.98
PHGDH-232ENST00000641947 ADD2P35612 726 aa21.14■□□□□ 0.97
PHGDH-232ENST00000641947 GPR101Q96P66 508 aaPredicted RBP21.14■□□□□ 0.97
PHGDH-232ENST00000641947 PUS7LQ9H0K6 701 aaKnown RBP21.14■□□□□ 0.97
PHGDH-232ENST00000641947 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.97
PHGDH-232ENST00000641947 XDHP47989 1333 aa21.14■□□□□ 0.97
PHGDH-232ENST00000641947 TCRBV5S4A2TA0A5A2 114 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 IDH1O75874 414 aaKnown RBP21.13■□□□□ 0.97
PHGDH-232ENST00000641947 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-232ENST00000641947 CREB3L3Q68CJ9 461 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 ANKIB1Q9P2G1 1089 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 FOXP2O15409 715 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 PDE6AP16499 860 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 APPBP2Q92624 585 aa21.13■□□□□ 0.97
PHGDH-232ENST00000641947 DLEC1Q9Y238 1755 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 SLC27A2O14975 620 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 BBOX1O75936 387 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 WASHC4Q2M389 1173 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 ADCK5Q3MIX3 580 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 CAVIN4Q5BKX8 364 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms