RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
CASC19-230ENST00000641421 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
CASC19-230ENST00000641421 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
CASC19-230ENST00000641421 DDX60Q8IY21 1712 aaKnown RBP12.69□□□□□ -0.38
CASC19-230ENST00000641421 LAMB2P55268 1798 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 GOLGA6L3A6NEY3 463 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
CASC19-230ENST00000641421 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
CASC19-230ENST00000641421 COL9A3Q14050 684 aaPredicted RBP12.68□□□□□ -0.38
CASC19-230ENST00000641421 TOB2Q14106 344 aaPredicted RBP12.68□□□□□ -0.38
CASC19-230ENST00000641421 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 APPBP2Q92624 585 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
CASC19-230ENST00000641421 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 BTAF1O14981 1849 aa12.68□□□□□ -0.38
CASC19-230ENST00000641421 HMGB1P09429 215 aaKnown RBP12.67□□□□□ -0.38
CASC19-230ENST00000641421 GJB2P29033 226 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 PHKA1P46020 1223 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 AFF2P51816 1311 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 STX6O43752 255 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
CASC19-230ENST00000641421 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
CASC19-230ENST00000641421 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
CASC19-230ENST00000641421 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
CASC19-230ENST00000641421 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
CASC19-230ENST00000641421 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 GNPATO15228 680 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 SYT1P21579 422 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 HSPA1LP34931 641 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 BICDL1Q6ZP65 573 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
CASC19-230ENST00000641421 NARFQ9UHQ1 456 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
CASC19-230ENST00000641421 ZPR1O75312 459 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 ATRNO75882 1429 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.38
CASC19-230ENST00000641421 ADD2P35612 726 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
CASC19-230ENST00000641421 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 Q6ZUG5 572 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 DHX32Q7L7V1 743 aaKnown RBP12.65□□□□□ -0.38
CASC19-230ENST00000641421 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 NYXQ9GZU5 481 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
CASC19-230ENST00000641421 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
CASC19-230ENST00000641421 E7EWF7 191 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 FGD1P98174 961 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 CHRNDQ07001 517 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 UBE3CQ15386 1083 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
CASC19-230ENST00000641421 PUS7LQ9H0K6 701 aaKnown RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 TRPC5Q9UL62 973 aaPredicted RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
CASC19-230ENST00000641421 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 GPAA1O43292 621 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
CASC19-230ENST00000641421 F13A1P00488 732 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 STK3Q13188 491 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
CASC19-230ENST00000641421 TTLL5Q6EMB2 1281 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 ATP6V1DQ9Y5K8 247 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 MYH7P12883 1935 aa12.63□□□□□ -0.39
CASC19-230ENST00000641421 SNAP23O00161 211 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 FOXP2O15409 715 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 MBD3O95983 291 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 PDE6AP16499 860 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 PDCP20941 246 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 ZNF532Q9HCE3 1301 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 FGAP02671 866 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 MRE11P49959 708 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms