RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 CRHR2Q13324 411 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 ARMC9Q7Z3E5 817 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 ZNF333Q96JL9 665 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 BRCA2P51587 3418 aa12.71□□□□□ -0.37
PHGDH-212ENST00000641247 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-212ENST00000641247 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-212ENST00000641247 RIPK4P57078 832 aa12.7□□□□□ -0.38
PHGDH-212ENST00000641247 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
PHGDH-212ENST00000641247 MAP3K11Q16584 847 aa12.7□□□□□ -0.38
PHGDH-212ENST00000641247 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
PHGDH-212ENST00000641247 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
PHGDH-212ENST00000641247 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
PHGDH-212ENST00000641247 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
PHGDH-212ENST00000641247 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 NF2P35240 595 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 INHBEP58166 350 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-212ENST00000641247 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
PHGDH-212ENST00000641247 XDHP47989 1333 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 AOX1Q06278 1338 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 NEFMP07197 916 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 KLRK1P26718 216 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 SP3Q02447 781 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
PHGDH-212ENST00000641247 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-212ENST00000641247 CHL1O00533 1208 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 KIAA0825Q8IV33 1275 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 DEFB129Q9H1M3 183 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
PHGDH-212ENST00000641247 USP2O75604 605 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-212ENST00000641247 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-212ENST00000641247 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
PHGDH-212ENST00000641247 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
PHGDH-212ENST00000641247 PHAXQ9H814 394 aaKnown RBP12.66□□□□□ -0.38
PHGDH-212ENST00000641247 PDE8AO60658 829 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 TMPOP42166 694 aaKnown RBP12.65□□□□□ -0.38
PHGDH-212ENST00000641247 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 NBPF12Q5TAG4 269 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-212ENST00000641247 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
PHGDH-212ENST00000641247 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 MYD88Q99836 296 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 CENPFP49454 3210 aa12.65□□□□□ -0.38
PHGDH-212ENST00000641247 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
PHGDH-212ENST00000641247 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
PHGDH-212ENST00000641247 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 CERS5Q8N5B7 392 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
PHGDH-212ENST00000641247 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-212ENST00000641247 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
PHGDH-212ENST00000641247 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-212ENST00000641247 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-212ENST00000641247 GTF2IP78347 998 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 SLC9C1Q4G0N8 1177 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
PHGDH-212ENST00000641247 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
PHGDH-212ENST00000641247 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 SNAP23O00161 211 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 MTFR1Q15390 333 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 BRI3BPQ8WY22 251 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-212ENST00000641247 GREM2Q9H772 168 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-212ENST00000641247 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 ZNF646O15015 1829 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-212ENST00000641247 PSME4Q14997 1843 aa12.62□□□□□ -0.39
PHGDH-212ENST00000641247 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-212ENST00000641247 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
PHGDH-212ENST00000641247 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
PHGDH-212ENST00000641247 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
PHGDH-212ENST00000641247 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
PHGDH-212ENST00000641247 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-212ENST00000641247 CTGFP29279 349 aa12.6□□□□□ -0.39
PHGDH-212ENST00000641247 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
PHGDH-212ENST00000641247 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
PHGDH-212ENST00000641247 UBE2Q1Q7Z7E8 422 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms