RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
HNRNPU-229ENST00000640440 FBXW7Q969H0 707 aa18.22■□□□□ 0.51
HNRNPU-229ENST00000640440 THSD7BQ9C0I4 1608 aa18.22■□□□□ 0.51
HNRNPU-229ENST00000640440 PTPRCP08575 1304 aa18.22■□□□□ 0.51
HNRNPU-229ENST00000640440 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
HNRNPU-229ENST00000640440 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 TAF7LQ5H9L4 462 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 COL13A1Q5TAT6 717 aaPredicted RBP18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 KRT26Q7Z3Y9 468 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 HELBQ8NG08 1087 aaPredicted RBP18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 ZNF594Q96JF6 807 aaPredicted RBP18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 COA1Q9GZY4 146 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 TLL2Q9Y6L7 1015 aa18.21■□□□□ 0.51
HNRNPU-229ENST00000640440 TAF5LO75529 589 aa18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 ZNF280AP59817 542 aaPredicted RBP18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 GRM1Q13255 1194 aa18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 DLK2Q6UY11 383 aa18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 DCPSQ96C86 337 aaKnown RBP18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 GMLQ99445 158 aa18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
HNRNPU-229ENST00000640440 ADM5C9JUS6 153 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 SNAP23O00161 211 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 USP17L8P0C7I0 530 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 CYP4F22Q6NT55 531 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 CAPNS2Q96L46 248 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 GGA3Q9NZ52 723 aa18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 ASTN2O75129 1339 aaPredicted RBP18.19■□□□□ 0.5
HNRNPU-229ENST00000640440 ECE1P42892 770 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 DACT2Q5SW24 774 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 TRMT2AQ8IZ69 625 aaKnown RBP18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 MYOZ2Q9NPC6 264 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 UTYO14607 1347 aa18.18■□□□□ 0.5
HNRNPU-229ENST00000640440 FOXN1O15353 648 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 SCARF1Q14162 830 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
HNRNPU-229ENST00000640440 PLIN1O60240 522 aa18.16■□□□□ 0.5
HNRNPU-229ENST00000640440 SULF1Q8IWU6 871 aa18.16■□□□□ 0.5
HNRNPU-229ENST00000640440 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-229ENST00000640440 MYO3BQ8WXR4 1341 aa18.16■□□□□ 0.5
HNRNPU-229ENST00000640440 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
HNRNPU-229ENST00000640440 ECM29Q5VYK3 1845 aa18.15■□□□□ 0.5
HNRNPU-229ENST00000640440 ANGEL2Q5VTE6 544 aaKnown RBP18.15■□□□□ 0.5
HNRNPU-229ENST00000640440 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
HNRNPU-229ENST00000640440 CD209Q9NNX6 404 aa18.15■□□□□ 0.5
HNRNPU-229ENST00000640440 WBP1LQ9NX94 342 aa18.15■□□□□ 0.5
HNRNPU-229ENST00000640440 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
HNRNPU-229ENST00000640440 GTF2IP78347 998 aa18.14■□□□□ 0.49
HNRNPU-229ENST00000640440 C15orf52Q6ZUT6 534 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-229ENST00000640440 OGFOD1Q8N543 542 aa18.14■□□□□ 0.49
HNRNPU-229ENST00000640440 ANKRD44Q8N8A2 993 aa18.14■□□□□ 0.49
HNRNPU-229ENST00000640440 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 ZNF804AQ7Z570 1209 aa18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 KIAA0825Q8IV33 1275 aa18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 HHIPL1Q96JK4 782 aa18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 GBA2Q9HCG7 927 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-229ENST00000640440 AOC2O75106 756 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 CTCFP49711 727 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 HUNKP57058 714 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 SCAF8Q9UPN6 1271 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 ARAP2Q8WZ64 1704 aa18.12■□□□□ 0.49
HNRNPU-229ENST00000640440 MYH13Q9UKX3 1938 aa18.11■□□□□ 0.49
HNRNPU-229ENST00000640440 NBPF9Q3BBW0 867 aa18.11■□□□□ 0.49
HNRNPU-229ENST00000640440 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
HNRNPU-229ENST00000640440 PITPNM2Q9BZ72 1349 aa18.11■□□□□ 0.49
HNRNPU-229ENST00000640440 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
HNRNPU-229ENST00000640440 PAPPA2Q9BXP8 1791 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 SASH1O94885 1247 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 IL1R1P14778 569 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 C2orf69Q8N8R5 385 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 HDAC9Q9UKV0 1011 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 JAG2Q9Y219 1238 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 CASP8AP2Q9UKL3 1982 aa18.1■□□□□ 0.49
HNRNPU-229ENST00000640440 MROH5Q6ZUA9 1318 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 WNT10BO00744 389 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 MAP2K2P36507 400 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 UBE4AQ14139 1066 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 MIER1Q8N108 512 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 RIPOR2Q9Y4F9 1068 aa18.09■□□□□ 0.49
HNRNPU-229ENST00000640440 HSPA8P11142 646 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-229ENST00000640440 LBX1P52954 281 aa18.08■□□□□ 0.48
HNRNPU-229ENST00000640440 LRRC24Q50LG9 513 aa18.08■□□□□ 0.48
HNRNPU-229ENST00000640440 DIEXFQ68CQ4 756 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms