RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 ISCA1Q9BUE6 129 aa14.99□□□□□ -0.01
MECP2-226ENST00000640414 ANGEL1Q9UNK9 670 aaKnown RBP14.99□□□□□ -0.01
MECP2-226ENST00000640414 FZD1Q9UP38 647 aa14.99□□□□□ -0.01
MECP2-226ENST00000640414 LAMB1P07942 1786 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 NEFMP07197 916 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 PODNQ7Z5L7 613 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 ZNF333Q96JL9 665 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 PLEKHF1Q96S99 279 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 MXD3Q9BW11 206 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 SEC31BQ9NQW1 1179 aa14.98□□□□□ -0.01
MECP2-226ENST00000640414 ZNF646O15015 1829 aaPredicted RBP14.97□□□□□ -0.01
MECP2-226ENST00000640414 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
MECP2-226ENST00000640414 SASH1O94885 1247 aa14.97□□□□□ -0.01
MECP2-226ENST00000640414 CRHR2Q13324 411 aa14.97□□□□□ -0.01
MECP2-226ENST00000640414 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
MECP2-226ENST00000640414 IRS4O14654 1257 aaPredicted RBP14.96□□□□□ -0.01
MECP2-226ENST00000640414 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.01
MECP2-226ENST00000640414 PLBD2Q8NHP8 589 aa14.96□□□□□ -0.01
MECP2-226ENST00000640414 SLC10A4Q96EP9 437 aa14.96□□□□□ -0.01
MECP2-226ENST00000640414 WNK4Q96J92 1243 aa14.96□□□□□ -0.01
MECP2-226ENST00000640414 SP3Q02447 781 aa14.95□□□□□ -0.02
MECP2-226ENST00000640414 DACT2Q5SW24 774 aa14.95□□□□□ -0.02
MECP2-226ENST00000640414 OGFOD1Q8N543 542 aa14.95□□□□□ -0.02
MECP2-226ENST00000640414 CLMNQ96JQ2 1002 aa14.95□□□□□ -0.02
MECP2-226ENST00000640414 RBM27Q9P2N5 1060 aaKnown RBP14.95□□□□□ -0.02
MECP2-226ENST00000640414 XDHP47989 1333 aa14.94□□□□□ -0.02
MECP2-226ENST00000640414 MAP3K11Q16584 847 aa14.94□□□□□ -0.02
MECP2-226ENST00000640414 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
MECP2-226ENST00000640414 APOBEC3FQ8IUX4 373 aaKnown RBP14.94□□□□□ -0.02
MECP2-226ENST00000640414 CEP290O15078 2479 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
MECP2-226ENST00000640414 SLC4A8Q2Y0W8 1093 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 SLC9C1Q4G0N8 1177 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 PTCH2Q9Y6C5 1203 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 SSC5DA1L4H1 1573 aa14.93□□□□□ -0.02
MECP2-226ENST00000640414 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 MYCP01106 439 aaPredicted RBP14.92□□□□□ -0.02
MECP2-226ENST00000640414 ATP2B4P23634 1241 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 KRT24Q2M2I5 525 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 NBPF11Q86T75 865 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 ZBED3Q96IU2 234 aaPredicted RBP14.92□□□□□ -0.02
MECP2-226ENST00000640414 PTPN18Q99952 460 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
MECP2-226ENST00000640414 COL1A1P02452 1464 aaPredicted RBP14.91□□□□□ -0.02
MECP2-226ENST00000640414 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
MECP2-226ENST00000640414 GJA5P36382 358 aa14.91□□□□□ -0.02
MECP2-226ENST00000640414 OTUD7BQ6GQQ9 843 aa14.91□□□□□ -0.02
MECP2-226ENST00000640414 CCDC85AQ96PX6 553 aaPredicted RBP14.91□□□□□ -0.02
MECP2-226ENST00000640414 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
MECP2-226ENST00000640414 STRIP1Q5VSL9 837 aa14.9□□□□□ -0.02
MECP2-226ENST00000640414 DEFB129Q9H1M3 183 aa14.9□□□□□ -0.02
MECP2-226ENST00000640414 MAPK8IP3Q9UPT6 1336 aa14.9□□□□□ -0.02
MECP2-226ENST00000640414 TESPA1A2RU30 521 aaPredicted RBP14.89□□□□□ -0.03
MECP2-226ENST00000640414 PPP1R12BO60237 982 aaPredicted RBP14.89□□□□□ -0.03
MECP2-226ENST00000640414 CCDC152Q4G0S7 254 aa14.89□□□□□ -0.03
MECP2-226ENST00000640414 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
MECP2-226ENST00000640414 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
MECP2-226ENST00000640414 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
MECP2-226ENST00000640414 MMP14P50281 582 aa14.88□□□□□ -0.03
MECP2-226ENST00000640414 ANKRD18AQ8IVF6 992 aa14.88□□□□□ -0.03
MECP2-226ENST00000640414 SH3TC2Q8TF17 1288 aa14.88□□□□□ -0.03
MECP2-226ENST00000640414 DPF3Q92784 378 aa14.88□□□□□ -0.03
MECP2-226ENST00000640414 ADAMTS8Q9UP79 889 aa14.88□□□□□ -0.03
MECP2-226ENST00000640414 UNCXA6NJT0 531 aa14.87□□□□□ -0.03
MECP2-226ENST00000640414 ARHGEF6Q15052 776 aa14.87□□□□□ -0.03
MECP2-226ENST00000640414 SHISA4Q96DD7 197 aa14.87□□□□□ -0.03
MECP2-226ENST00000640414 HSP90B1P14625 803 aaKnown RBP14.86□□□□□ -0.03
MECP2-226ENST00000640414 RIPK4P57078 832 aa14.86□□□□□ -0.03
MECP2-226ENST00000640414 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
MECP2-226ENST00000640414 HDGFL1Q5TGJ6 251 aa14.86□□□□□ -0.03
MECP2-226ENST00000640414 TXNRD3Q86VQ6 643 aa14.86□□□□□ -0.03
MECP2-226ENST00000640414 JARID2Q92833 1246 aaPredicted RBP14.86□□□□□ -0.03
MECP2-226ENST00000640414 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
MECP2-226ENST00000640414 DBF4Q9UBU7 674 aaPredicted RBP14.86□□□□□ -0.03
MECP2-226ENST00000640414 RANBP2P49792 3224 aaKnown RBP14.86□□□□□ -0.03
MECP2-226ENST00000640414 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 PDE8AO60658 829 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 USP2O75604 605 aaPredicted RBP14.85□□□□□ -0.03
MECP2-226ENST00000640414 IREB2P48200 963 aaKnown RBP14.85□□□□□ -0.03
MECP2-226ENST00000640414 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
MECP2-226ENST00000640414 CCT4P50991 539 aaKnown RBP14.85□□□□□ -0.03
MECP2-226ENST00000640414 TTLL5Q6EMB2 1281 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 PPP2R3BQ9Y5P8 575 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 SPEF2Q9C093 1822 aa14.85□□□□□ -0.03
MECP2-226ENST00000640414 OTOFQ9HC10 1997 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 SOX1O00570 391 aaPredicted RBP14.84□□□□□ -0.03
MECP2-226ENST00000640414 PCCAP05165 728 aaPredicted RBP14.84□□□□□ -0.03
MECP2-226ENST00000640414 DLGAP5Q15398 846 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
MECP2-226ENST00000640414 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 NBPF12Q5TAG4 269 aaPredicted RBP14.84□□□□□ -0.03
MECP2-226ENST00000640414 ANKRD13AQ8IZ07 590 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 PNNQ9H307 717 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms