RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 VGLL2Q8N8G2 317 aa27.21■■□□□ 1.95
SCN1B-206ENST00000638536 HDAC5Q9UQL6 1122 aa27.21■■□□□ 1.95
SCN1B-206ENST00000638536 EYA2O00167 538 aa27.2■■□□□ 1.95
SCN1B-206ENST00000638536 EPHX2P34913 555 aa27.2■■□□□ 1.95
SCN1B-206ENST00000638536 MTX1Q13505 466 aa27.2■■□□□ 1.95
SCN1B-206ENST00000638536 MROH5Q6ZUA9 1318 aa27.2■■□□□ 1.94
SCN1B-206ENST00000638536 PNMA6EA0A0J9YXQ4 647 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 METTL24Q5JXM2 366 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 RBM46Q8TBY0 533 aaKnown RBP27.19■■□□□ 1.94
SCN1B-206ENST00000638536 GPRC5DQ9NZD1 345 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 SRGAP3O43295 1099 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 PODNQ7Z5L7 613 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 COG6Q9Y2V7 657 aa27.19■■□□□ 1.94
SCN1B-206ENST00000638536 C15orf52Q6ZUT6 534 aaKnown RBP27.18■■□□□ 1.94
SCN1B-206ENST00000638536 COA1Q9GZY4 146 aa27.18■■□□□ 1.94
SCN1B-206ENST00000638536 VIL1P09327 827 aaKnown RBP27.17■■□□□ 1.94
SCN1B-206ENST00000638536 EAPPQ56P03 285 aaPredicted RBP27.17■■□□□ 1.94
SCN1B-206ENST00000638536 MXD3Q9BW11 206 aa27.17■■□□□ 1.94
SCN1B-206ENST00000638536 ADAMTSL1Q8N6G6 1762 aa27.17■■□□□ 1.94
SCN1B-206ENST00000638536 PDE8BO95263 885 aa27.16■■□□□ 1.94
SCN1B-206ENST00000638536 CD209Q9NNX6 404 aa27.16■■□□□ 1.94
SCN1B-206ENST00000638536 COPRSQ9NQ92 184 aa27.16■■□□□ 1.94
SCN1B-206ENST00000638536 LMOD1P29536 600 aaPredicted RBP27.16■■□□□ 1.94
SCN1B-206ENST00000638536 UBE4AQ14139 1066 aa27.16■■□□□ 1.94
SCN1B-206ENST00000638536 MVPQ14764 893 aaKnown RBP27.15■■□□□ 1.94
SCN1B-206ENST00000638536 CNOT7Q9UIV1 285 aaKnown RBP27.15■■□□□ 1.94
SCN1B-206ENST00000638536 GYG1P46976 350 aa27.14■■□□□ 1.94
SCN1B-206ENST00000638536 USP17L3A6NCW0 530 aa27.13■■□□□ 1.93
SCN1B-206ENST00000638536 USP17L4A6NCW7 530 aa27.13■■□□□ 1.93
SCN1B-206ENST00000638536 USP17L1Q7RTZ2 530 aa27.13■■□□□ 1.93
SCN1B-206ENST00000638536 FAM84BQ96KN1 310 aaPredicted RBP27.13■■□□□ 1.93
SCN1B-206ENST00000638536 CIAO1O76071 339 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 MS4A1P11836 297 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 FGFR2P21802 821 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 RSBN1LQ6PCB5 846 aaPredicted RBP27.12■■□□□ 1.93
SCN1B-206ENST00000638536 MICALL2Q8IY33 904 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 SMC1BQ8NDV3 1235 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.12■■□□□ 1.93
SCN1B-206ENST00000638536 EGFRP00533 1210 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 ATP8B2P98198 1209 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 DACT2Q5SW24 774 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 TRPM4Q8TD43 1214 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 DPF2Q92785 391 aa27.12■■□□□ 1.93
SCN1B-206ENST00000638536 HIRAP54198 1017 aaPredicted RBP27.11■■□□□ 1.93
SCN1B-206ENST00000638536 FBXW7Q969H0 707 aa27.11■■□□□ 1.93
SCN1B-206ENST00000638536 GMLQ99445 158 aa27.11■■□□□ 1.93
SCN1B-206ENST00000638536 FBXO3Q9UK99 471 aa27.11■■□□□ 1.93
SCN1B-206ENST00000638536 IL1R1P14778 569 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 GTF2IP78347 998 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 FSTL1Q12841 308 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 POLA2Q14181 598 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 SAMD7Q7Z3H4 446 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 PNMA8AQ86V59 439 aaPredicted RBP27.1■■□□□ 1.93
SCN1B-206ENST00000638536 LDHDQ86WU2 507 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 ADARB2Q9NS39 739 aaKnown RBP27.1■■□□□ 1.93
SCN1B-206ENST00000638536 JAG2Q9Y219 1238 aa27.1■■□□□ 1.93
SCN1B-206ENST00000638536 POLR2AP24928 1970 aaKnown RBP27.1■■□□□ 1.93
SCN1B-206ENST00000638536 STRIP1Q5VSL9 837 aa27.09■■□□□ 1.93
SCN1B-206ENST00000638536 TTLL5Q6EMB2 1281 aa27.09■■□□□ 1.93
SCN1B-206ENST00000638536 CHADLQ6NUI6 762 aa27.09■■□□□ 1.93
SCN1B-206ENST00000638536 ZNF804AQ7Z570 1209 aa27.09■■□□□ 1.93
SCN1B-206ENST00000638536 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
SCN1B-206ENST00000638536 RPS12P25398 132 aaKnown RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 IL15P40933 162 aaPredicted RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 PDE3AQ14432 1141 aa27.08■■□□□ 1.93
SCN1B-206ENST00000638536 PUM3Q15397 648 aaKnown RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 HIBADHP31937 336 aaKnown RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 CEP85Q6P2H3 762 aa27.08■■□□□ 1.93
SCN1B-206ENST00000638536 USP50Q70EL3 339 aaPredicted RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 FBXO33Q7Z6M2 555 aa27.08■■□□□ 1.93
SCN1B-206ENST00000638536 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.08■■□□□ 1.93
SCN1B-206ENST00000638536 SSH3Q8TE77 659 aa27.08■■□□□ 1.93
SCN1B-206ENST00000638536 DDX19BQ9UMR2 479 aa27.08■■□□□ 1.93
SCN1B-206ENST00000638536 BCAMP50895 628 aa27.07■■□□□ 1.92
SCN1B-206ENST00000638536 TBC1D10BQ4KMP7 808 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-206ENST00000638536 MAP1SQ66K74 1059 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-206ENST00000638536 AGBL3Q8NEM8 1001 aa27.07■■□□□ 1.92
SCN1B-206ENST00000638536 ZBTB40Q9NUA8 1239 aa27.07■■□□□ 1.92
SCN1B-206ENST00000638536 CEP126Q9P2H0 1117 aa27.07■■□□□ 1.92
SCN1B-206ENST00000638536 IQSEC3Q9UPP2 1182 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-206ENST00000638536 H7C1D1 291 aa27.06■■□□□ 1.92
SCN1B-206ENST00000638536 CERS5Q8N5B7 392 aa27.06■■□□□ 1.92
SCN1B-206ENST00000638536 TDRD7Q8NHU6 1098 aaKnown RBP27.06■■□□□ 1.92
SCN1B-206ENST00000638536 ZNF609O15014 1411 aa27.06■■□□□ 1.92
SCN1B-206ENST00000638536 TFCP2Q12800 502 aa27.05■■□□□ 1.92
SCN1B-206ENST00000638536 RBM26Q5T8P6 1007 aaKnown RBP27.05■■□□□ 1.92
SCN1B-206ENST00000638536 HSPA6P17066 643 aa27.05■■□□□ 1.92
SCN1B-206ENST00000638536 LPIN2Q92539 896 aa27.05■■□□□ 1.92
SCN1B-206ENST00000638536 ATP2B3Q16720 1220 aa27.04■■□□□ 1.92
SCN1B-206ENST00000638536 SASH1O94885 1247 aa27.03■■□□□ 1.92
SCN1B-206ENST00000638536 ITGBL1O95965 494 aaPredicted RBP27.03■■□□□ 1.92
SCN1B-206ENST00000638536 IFIT1P09914 478 aaKnown RBP27.03■■□□□ 1.92
SCN1B-206ENST00000638536 RRP1P56182 461 aaKnown RBP27.03■■□□□ 1.92
SCN1B-206ENST00000638536 USP17L8P0C7I0 530 aa27.02■■□□□ 1.92
SCN1B-206ENST00000638536 ZNF280AP59817 542 aaPredicted RBP27.02■■□□□ 1.92
SCN1B-206ENST00000638536 TIMM10P62072 90 aa27.02■■□□□ 1.92
SCN1B-206ENST00000638536 HTRA3P83110 453 aa27.02■■□□□ 1.92
SCN1B-206ENST00000638536 CNTROBQ8N137 903 aa27.02■■□□□ 1.92
SCN1B-206ENST00000638536 SLC5A1P13866 664 aa27.01■■□□□ 1.92
SCN1B-206ENST00000638536 ADORA1P30542 326 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms