RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LEMD3Q9Y2U8 911 aa22.41■■□□□ 1.18
PNKP-230ENST00000638016 UTYO14607 1347 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 IRS2Q9Y4H2 1338 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 USP17L3A6NCW0 530 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 USP17L4A6NCW7 530 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 CCDC57Q2TAC2 916 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 KIF4BQ2VIQ3 1234 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 ALDH1L2Q3SY69 923 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 USP17L1Q7RTZ2 530 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 PODNQ7Z5L7 613 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 GMLQ99445 158 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 PUS3Q9BZE2 481 aaKnown RBP22.4■■□□□ 1.18
PNKP-230ENST00000638016 BICC1Q9H694 974 aaKnown RBP22.4■■□□□ 1.18
PNKP-230ENST00000638016 ZNF408Q9H9D4 720 aa22.4■■□□□ 1.18
PNKP-230ENST00000638016 KCNJ4P48050 445 aa22.39■■□□□ 1.17
PNKP-230ENST00000638016 USP48Q86UV5 1035 aa22.39■■□□□ 1.17
PNKP-230ENST00000638016 ANKRD44Q8N8A2 993 aa22.39■■□□□ 1.17
PNKP-230ENST00000638016 ZC3H15Q8WU90 426 aaKnown RBP22.39■■□□□ 1.17
PNKP-230ENST00000638016 ZNF609O15014 1411 aa22.39■■□□□ 1.17
PNKP-230ENST00000638016 RASSF10A6NK89 507 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 ADM5C9JUS6 153 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 PLIN1O60240 522 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
PNKP-230ENST00000638016 TAF7LQ5H9L4 462 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 DACT2Q5SW24 774 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 COA1Q9GZY4 146 aa22.38■■□□□ 1.17
PNKP-230ENST00000638016 ZNF280AP59817 542 aaPredicted RBP22.37■■□□□ 1.17
PNKP-230ENST00000638016 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
PNKP-230ENST00000638016 AGBL3Q8NEM8 1001 aa22.37■■□□□ 1.17
PNKP-230ENST00000638016 USP44Q9H0E7 712 aa22.37■■□□□ 1.17
PNKP-230ENST00000638016 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
PNKP-230ENST00000638016 DEFB115Q30KQ5 88 aa22.36■■□□□ 1.17
PNKP-230ENST00000638016 CDC37L1Q7L3B6 337 aa22.36■■□□□ 1.17
PNKP-230ENST00000638016 CNNM1Q9NRU3 951 aa22.36■■□□□ 1.17
PNKP-230ENST00000638016 GGA3Q9NZ52 723 aa22.36■■□□□ 1.17
PNKP-230ENST00000638016 SCAF8Q9UPN6 1271 aaKnown RBP22.36■■□□□ 1.17
PNKP-230ENST00000638016 GRM1Q13255 1194 aa22.35■■□□□ 1.17
PNKP-230ENST00000638016 RABL6Q3YEC7 729 aaPredicted RBP22.35■■□□□ 1.17
PNKP-230ENST00000638016 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
PNKP-230ENST00000638016 USP17L8P0C7I0 530 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
PNKP-230ENST00000638016 GTF2IP78347 998 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 CYP4F22Q6NT55 531 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 PAXIP1Q6ZW49 1069 aaPredicted RBP22.34■■□□□ 1.17
PNKP-230ENST00000638016 KLHDC4Q8TBB5 520 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 CD209Q9NNX6 404 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 JAG2Q9Y219 1238 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 TLL2Q9Y6L7 1015 aa22.34■■□□□ 1.17
PNKP-230ENST00000638016 SCARF1Q14162 830 aa22.33■■□□□ 1.17
PNKP-230ENST00000638016 COL13A1Q5TAT6 717 aaPredicted RBP22.33■■□□□ 1.17
PNKP-230ENST00000638016 STRIP1Q5VSL9 837 aa22.33■■□□□ 1.17
PNKP-230ENST00000638016 MYOZ2Q9NPC6 264 aa22.33■■□□□ 1.17
PNKP-230ENST00000638016 WDR33Q9C0J8 1336 aaKnown RBP22.32■■□□□ 1.16
PNKP-230ENST00000638016 CT47B1P0C2W7 299 aaPredicted RBP22.32■■□□□ 1.16
PNKP-230ENST00000638016 LRRC24Q50LG9 513 aa22.32■■□□□ 1.16
PNKP-230ENST00000638016 ANGEL2Q5VTE6 544 aaKnown RBP22.32■■□□□ 1.16
PNKP-230ENST00000638016 TTLL5Q6EMB2 1281 aa22.32■■□□□ 1.16
PNKP-230ENST00000638016 DCPSQ96C86 337 aaKnown RBP22.32■■□□□ 1.16
PNKP-230ENST00000638016 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
PNKP-230ENST00000638016 SAPCD2Q86UD0 394 aa22.31■■□□□ 1.16
PNKP-230ENST00000638016 CAPNS2Q96L46 248 aa22.31■■□□□ 1.16
PNKP-230ENST00000638016 TNNQ9UQP3 1299 aa22.31■■□□□ 1.16
PNKP-230ENST00000638016 NBPF9Q3BBW0 867 aa22.3■■□□□ 1.16
PNKP-230ENST00000638016 C15orf52Q6ZUT6 534 aaKnown RBP22.3■■□□□ 1.16
PNKP-230ENST00000638016 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
PNKP-230ENST00000638016 CERS5Q8N5B7 392 aa22.3■■□□□ 1.16
PNKP-230ENST00000638016 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
PNKP-230ENST00000638016 THSD7BQ9C0I4 1608 aa22.3■■□□□ 1.16
PNKP-230ENST00000638016 FOXN1O15353 648 aa22.29■■□□□ 1.16
PNKP-230ENST00000638016 SASH1O94885 1247 aa22.29■■□□□ 1.16
PNKP-230ENST00000638016 GYG1P46976 350 aa22.28■■□□□ 1.16
PNKP-230ENST00000638016 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
PNKP-230ENST00000638016 AOC2O75106 756 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 BCAR3O75815 825 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 ZNF804AQ7Z570 1209 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 SULF1Q8IWU6 871 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 CDCA5Q96FF9 252 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 PCDHAC2Q9Y5I4 1007 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 MYO3BQ8WXR4 1341 aa22.27■■□□□ 1.16
PNKP-230ENST00000638016 IL1R1P14778 569 aa22.26■■□□□ 1.15
PNKP-230ENST00000638016 RFX5P48382 616 aaPredicted RBP22.26■■□□□ 1.15
PNKP-230ENST00000638016 PRAMEF18Q5VWM3 479 aa22.26■■□□□ 1.15
PNKP-230ENST00000638016 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
PNKP-230ENST00000638016 F8W031 263 aaPredicted RBP22.25■■□□□ 1.15
PNKP-230ENST00000638016 WNT10BO00744 389 aa22.25■■□□□ 1.15
PNKP-230ENST00000638016 VGLL2Q8N8G2 317 aa22.25■■□□□ 1.15
PNKP-230ENST00000638016 MEIS3Q99687 375 aa22.25■■□□□ 1.15
PNKP-230ENST00000638016 WBP1LQ9NX94 342 aa22.25■■□□□ 1.15
PNKP-230ENST00000638016 UBTFL1P0CB47 393 aaPredicted RBP22.24■■□□□ 1.15
PNKP-230ENST00000638016 HUNKP57058 714 aa22.24■■□□□ 1.15
PNKP-230ENST00000638016 UBE4AQ14139 1066 aa22.24■■□□□ 1.15
PNKP-230ENST00000638016 METTL24Q5JXM2 366 aa22.24■■□□□ 1.15
PNKP-230ENST00000638016 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
PNKP-230ENST00000638016 FAM84BQ96KN1 310 aaPredicted RBP22.24■■□□□ 1.15
PNKP-230ENST00000638016 GBA2Q9HCG7 927 aaPredicted RBP22.24■■□□□ 1.15
PNKP-230ENST00000638016 MROH5Q6ZUA9 1318 aa22.24■■□□□ 1.15
PNKP-230ENST00000638016 ZIC5Q96T25 663 aa22.23■■□□□ 1.15
PNKP-230ENST00000638016 IQSEC3Q9UPP2 1182 aaPredicted RBP22.23■■□□□ 1.15
PNKP-230ENST00000638016 LRRFIP2Q9Y608 721 aaKnown RBP22.23■■□□□ 1.15
PNKP-230ENST00000638016 AOX1Q06278 1338 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms