RNA–Protein interactions for RNA: ENST00000637107.1

CLN3-256, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-256ENST00000637107 GPR101Q96P66 508 aaPredicted RBP21.08■□□□□ 0.96
CLN3-256ENST00000637107 PSMD1Q99460 953 aa21.08■□□□□ 0.96
CLN3-256ENST00000637107 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.96
CLN3-256ENST00000637107 CCDC88AQ3V6T2 1871 aa21.07■□□□□ 0.96
CLN3-256ENST00000637107 XDHP47989 1333 aa21.07■□□□□ 0.96
CLN3-256ENST00000637107 SALL3Q9BXA9 1300 aa21.07■□□□□ 0.96
CLN3-256ENST00000637107 SBF1O95248 1867 aa21.07■□□□□ 0.96
CLN3-256ENST00000637107 TBC1D16Q8TBP0 767 aa21.07■□□□□ 0.96
CLN3-256ENST00000637107 KIF2CQ99661 725 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
CLN3-256ENST00000637107 LTBP3Q9NS15 1303 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 C6orf229H3BNL8 230 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 CIAO1O76071 339 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 UFL1O94874 794 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 METTL24Q5JXM2 366 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 SNX21Q969T3 373 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 ANKRD2Q9GZV1 360 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 GGA1Q9UJY5 639 aa21.06■□□□□ 0.96
CLN3-256ENST00000637107 MROH5Q6ZUA9 1318 aa21.05■□□□□ 0.96
CLN3-256ENST00000637107 SURF6O75683 361 aaKnown RBP21.05■□□□□ 0.96
CLN3-256ENST00000637107 FBXO3Q9UK99 471 aa21.05■□□□□ 0.96
CLN3-256ENST00000637107 VGLL2Q8N8G2 317 aa21.04■□□□□ 0.96
CLN3-256ENST00000637107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.04■□□□□ 0.96
CLN3-256ENST00000637107 FRAT2O75474 233 aaPredicted RBP21.03■□□□□ 0.96
CLN3-256ENST00000637107 ATP2B4P23634 1241 aa21.03■□□□□ 0.96
CLN3-256ENST00000637107 IL15P40933 162 aaPredicted RBP21.03■□□□□ 0.96
CLN3-256ENST00000637107 G3BP1Q13283 466 aaKnown RBP eCLIP21.03■□□□□ 0.96
CLN3-256ENST00000637107 AOC3Q16853 763 aa21.03■□□□□ 0.96
CLN3-256ENST00000637107 ZNF804BA4D1E1 1349 aa21.03■□□□□ 0.96
CLN3-256ENST00000637107 RIMBP2O15034 1052 aa21.02■□□□□ 0.96
CLN3-256ENST00000637107 PDE8BO95263 885 aa21.02■□□□□ 0.96
CLN3-256ENST00000637107 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
CLN3-256ENST00000637107 RAB11FIP3O75154 756 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 LMNB1P20700 586 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 KLRK1P26718 216 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.95
CLN3-256ENST00000637107 WASHC4Q2M389 1173 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 SPRYD3Q8NCJ5 442 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 SUPT20HQ8NEM7 779 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 LEMD3Q9Y2U8 911 aa21.02■□□□□ 0.95
CLN3-256ENST00000637107 COL4A5P29400 1685 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 PPIP5K2O43314 1243 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 SASH1O94885 1247 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 MX1P20591 662 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 KCNJ4P48050 445 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 C9orf131Q5VYM1 1079 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 TXNRD3Q86VQ6 643 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 RNF181Q9P0P0 153 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 CEP126Q9P2H0 1117 aa21.01■□□□□ 0.95
CLN3-256ENST00000637107 TFCP2Q12800 502 aa21■□□□□ 0.95
CLN3-256ENST00000637107 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
CLN3-256ENST00000637107 USP26Q9BXU7 913 aa21■□□□□ 0.95
CLN3-256ENST00000637107 STAP2Q9UGK3 403 aa21■□□□□ 0.95
CLN3-256ENST00000637107 CHD4Q14839 1912 aa20.99■□□□□ 0.95
CLN3-256ENST00000637107 KIAA2012Q0VF49 1180 aa20.99■□□□□ 0.95
CLN3-256ENST00000637107 LARGE2Q8N3Y3 721 aa20.99■□□□□ 0.95
CLN3-256ENST00000637107 EYA3Q99504 573 aa20.99■□□□□ 0.95
CLN3-256ENST00000637107 TSHZ3Q63HK5 1081 aa20.98■□□□□ 0.95
CLN3-256ENST00000637107 ZC3H12CQ9C0D7 883 aaKnown RBP20.98■□□□□ 0.95
CLN3-256ENST00000637107 DICER1Q9UPY3 1922 aaKnown RBP20.98■□□□□ 0.95
CLN3-256ENST00000637107 FGFR2P21802 821 aa20.98■□□□□ 0.95
CLN3-256ENST00000637107 UBE4AQ14139 1066 aa20.98■□□□□ 0.95
CLN3-256ENST00000637107 IRS2Q9Y4H2 1338 aa20.98■□□□□ 0.95
CLN3-256ENST00000637107 PUM3Q15397 648 aaKnown RBP20.97■□□□□ 0.95
CLN3-256ENST00000637107 VPS33BQ9H267 617 aa20.97■□□□□ 0.95
CLN3-256ENST00000637107 AOX1Q06278 1338 aa20.97■□□□□ 0.95
CLN3-256ENST00000637107 MED23Q9ULK4 1368 aa20.97■□□□□ 0.95
CLN3-256ENST00000637107 DOK7Q18PE1 504 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 RHPN1Q8TCX5 695 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 DBNDD1Q9H9R9 158 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 IL1RAPL2Q9NP60 686 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 TIMM10P62072 90 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 CHMP5Q9NZZ3 219 aa20.96■□□□□ 0.95
CLN3-256ENST00000637107 ATP2B3Q16720 1220 aa20.95■□□□□ 0.94
CLN3-256ENST00000637107 KIF1BPQ96EK5 621 aa20.95■□□□□ 0.94
CLN3-256ENST00000637107 ERC2O15083 957 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 HSP90AB4PQ58FF6 505 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 TIAM2Q8IVF5 1701 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 LPIN2Q92539 896 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 REC8O95072 547 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 CD2BP2O95400 341 aaKnown RBP20.94■□□□□ 0.94
CLN3-256ENST00000637107 GYG1P46976 350 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 NIM1KQ8IY84 436 aa20.94■□□□□ 0.94
CLN3-256ENST00000637107 A0A1B0GUL7 405 aa20.93■□□□□ 0.94
CLN3-256ENST00000637107 C15orf52Q6ZUT6 534 aaKnown RBP20.93■□□□□ 0.94
CLN3-256ENST00000637107 ERC1Q8IUD2 1116 aa20.93■□□□□ 0.94
CLN3-256ENST00000637107 YDJCA8MPS7 323 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 ECE2O60344 883 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 IFIT1P09914 478 aaKnown RBP20.92■□□□□ 0.94
CLN3-256ENST00000637107 SLC5A1P13866 664 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 RABEP1Q15276 862 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 FAM84BQ96KN1 310 aaPredicted RBP20.92■□□□□ 0.94
CLN3-256ENST00000637107 KCNQ5Q9NR82 932 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 AKAP2Q9Y2D5 859 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 G3V3G9 751 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 ADORA1P30542 326 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 TNNI3KQ59H18 835 aa20.92■□□□□ 0.94
CLN3-256ENST00000637107 DCAF8Q5TAQ9 597 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms