RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ANGEL1Q9UNK9 670 aaKnown RBP23.74■■□□□ 1.39
CLN6-212ENST00000636020 XDHP47989 1333 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 RANBP2P49792 3224 aaKnown RBP23.74■■□□□ 1.39
CLN6-212ENST00000636020 ATP2B4P23634 1241 aa23.73■■□□□ 1.39
CLN6-212ENST00000636020 KRT24Q2M2I5 525 aa23.73■■□□□ 1.39
CLN6-212ENST00000636020 TMEM106CQ9BVX2 250 aa23.73■■□□□ 1.39
CLN6-212ENST00000636020 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
CLN6-212ENST00000636020 EFCC1Q9HA90 598 aa23.73■■□□□ 1.39
CLN6-212ENST00000636020 SASH1O94885 1247 aa23.72■■□□□ 1.39
CLN6-212ENST00000636020 APOBEC3FQ8IUX4 373 aaKnown RBP23.72■■□□□ 1.39
CLN6-212ENST00000636020 FZD1Q9UP38 647 aa23.72■■□□□ 1.39
CLN6-212ENST00000636020 ZBTB48P10074 688 aaPredicted RBP23.71■■□□□ 1.39
CLN6-212ENST00000636020 CAP1Q01518 475 aa23.71■■□□□ 1.39
CLN6-212ENST00000636020 ZBTB38Q8NAP3 1195 aaPredicted RBP23.71■■□□□ 1.39
CLN6-212ENST00000636020 ZNF333Q96JL9 665 aa23.71■■□□□ 1.39
CLN6-212ENST00000636020 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
CLN6-212ENST00000636020 H0YGN5 161 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 DLL1O00548 723 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 MMP14P50281 582 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 RIPK4P57078 832 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 CRHR2Q13324 411 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 MAP3K11Q16584 847 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 CCDC152Q4G0S7 254 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 WNK4Q96J92 1243 aa23.7■■□□□ 1.38
CLN6-212ENST00000636020 MYO3BQ8WXR4 1341 aa23.69■■□□□ 1.38
CLN6-212ENST00000636020 HSP90B1P14625 803 aaKnown RBP23.69■■□□□ 1.38
CLN6-212ENST00000636020 STRIP1Q5VSL9 837 aa23.69■■□□□ 1.38
CLN6-212ENST00000636020 CLMNQ96JQ2 1002 aa23.69■■□□□ 1.38
CLN6-212ENST00000636020 COL6A3P12111 3177 aa23.69■■□□□ 1.38
CLN6-212ENST00000636020 SP3Q02447 781 aa23.68■■□□□ 1.38
CLN6-212ENST00000636020 ZBED3Q96IU2 234 aaPredicted RBP23.68■■□□□ 1.38
CLN6-212ENST00000636020 DBF4Q9UBU7 674 aaPredicted RBP23.68■■□□□ 1.38
CLN6-212ENST00000636020 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
CLN6-212ENST00000636020 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
CLN6-212ENST00000636020 ANKRD18AQ8IVF6 992 aa23.67■■□□□ 1.38
CLN6-212ENST00000636020 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
CLN6-212ENST00000636020 ZNF646O15015 1829 aaPredicted RBP23.67■■□□□ 1.38
CLN6-212ENST00000636020 LAMB1P07942 1786 aa23.66■■□□□ 1.38
CLN6-212ENST00000636020 CHL1O00533 1208 aa23.65■■□□□ 1.38
CLN6-212ENST00000636020 PDE8AO60658 829 aa23.65■■□□□ 1.38
CLN6-212ENST00000636020 OTUD7BQ6GQQ9 843 aa23.65■■□□□ 1.38
CLN6-212ENST00000636020 FBXW7Q969H0 707 aa23.65■■□□□ 1.38
CLN6-212ENST00000636020 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
CLN6-212ENST00000636020 DEFB129Q9H1M3 183 aa23.65■■□□□ 1.38
CLN6-212ENST00000636020 UNCXA6NJT0 531 aa23.64■■□□□ 1.37
CLN6-212ENST00000636020 NBPF11Q86T75 865 aa23.64■■□□□ 1.37
CLN6-212ENST00000636020 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
CLN6-212ENST00000636020 PTPN18Q99952 460 aa23.64■■□□□ 1.37
CLN6-212ENST00000636020 HYPKQ9NX55 129 aa23.64■■□□□ 1.37
CLN6-212ENST00000636020 COL1A1P02452 1464 aaPredicted RBP23.63■■□□□ 1.37
CLN6-212ENST00000636020 PPP1R12BO60237 982 aaPredicted RBP23.63■■□□□ 1.37
CLN6-212ENST00000636020 PCCAP05165 728 aaPredicted RBP23.63■■□□□ 1.37
CLN6-212ENST00000636020 GJA5P36382 358 aa23.63■■□□□ 1.37
CLN6-212ENST00000636020 CHRDL2Q6WN34 429 aa23.63■■□□□ 1.37
CLN6-212ENST00000636020 SLC17A8Q8NDX2 589 aa23.63■■□□□ 1.37
CLN6-212ENST00000636020 COA1Q9GZY4 146 aa23.63■■□□□ 1.37
CLN6-212ENST00000636020 SSC5DA1L4H1 1573 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 TESPA1A2RU30 521 aaPredicted RBP23.62■■□□□ 1.37
CLN6-212ENST00000636020 HOXB7P09629 217 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 TMPOP42166 694 aaKnown RBP23.62■■□□□ 1.37
CLN6-212ENST00000636020 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 SLC4A8Q2Y0W8 1093 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 SLC9C1Q4G0N8 1177 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 KIAA0825Q8IV33 1275 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 MINPP1Q9UNW1 487 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 PTCH2Q9Y6C5 1203 aa23.62■■□□□ 1.37
CLN6-212ENST00000636020 TTLL5Q6EMB2 1281 aa23.61■■□□□ 1.37
CLN6-212ENST00000636020 JARID2Q92833 1246 aaPredicted RBP23.61■■□□□ 1.37
CLN6-212ENST00000636020 CCT4P50991 539 aaKnown RBP23.6■■□□□ 1.37
CLN6-212ENST00000636020 RIC3Q7Z5B4 369 aa23.6■■□□□ 1.37
CLN6-212ENST00000636020 TXNRD3Q86VQ6 643 aa23.6■■□□□ 1.37
CLN6-212ENST00000636020 CCDC191Q8NCU4 936 aa23.6■■□□□ 1.37
CLN6-212ENST00000636020 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
CLN6-212ENST00000636020 ARHGEF6Q15052 776 aa23.59■■□□□ 1.37
CLN6-212ENST00000636020 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
CLN6-212ENST00000636020 BSDC1Q9NW68 430 aaPredicted RBP23.59■■□□□ 1.37
CLN6-212ENST00000636020 PPP2R3BQ9Y5P8 575 aa23.59■■□□□ 1.37
CLN6-212ENST00000636020 MYD88Q99836 296 aa23.58■■□□□ 1.37
CLN6-212ENST00000636020 DLGAP5Q15398 846 aa23.57■■□□□ 1.36
CLN6-212ENST00000636020 SUPT20HL1Q3ZLR7 823 aa23.57■■□□□ 1.36
CLN6-212ENST00000636020 LAS1LQ9Y4W2 734 aaKnown RBP23.57■■□□□ 1.36
CLN6-212ENST00000636020 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
CLN6-212ENST00000636020 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
CLN6-212ENST00000636020 CWC25Q9NXE8 425 aaPredicted RBP23.56■■□□□ 1.36
CLN6-212ENST00000636020 CUL9Q8IWT3 2517 aa23.56■■□□□ 1.36
CLN6-212ENST00000636020 MYCP01106 439 aaPredicted RBP23.55■■□□□ 1.36
CLN6-212ENST00000636020 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
CLN6-212ENST00000636020 GTF2IP78347 998 aa23.55■■□□□ 1.36
CLN6-212ENST00000636020 MTMR14Q8NCE2 650 aa23.55■■□□□ 1.36
CLN6-212ENST00000636020 MS4A4AQ96JQ5 239 aa23.55■■□□□ 1.36
CLN6-212ENST00000636020 ZNF804BA4D1E1 1349 aa23.55■■□□□ 1.36
CLN6-212ENST00000636020 CTSWP56202 376 aa23.54■■□□□ 1.36
CLN6-212ENST00000636020 NBPF12Q5TAG4 269 aaPredicted RBP23.54■■□□□ 1.36
CLN6-212ENST00000636020 ANKRD13AQ8IZ07 590 aa23.54■■□□□ 1.36
CLN6-212ENST00000636020 PHAXQ9H814 394 aaKnown RBP23.54■■□□□ 1.36
CLN6-212ENST00000636020 LEMD3Q9Y2U8 911 aa23.54■■□□□ 1.36
CLN6-212ENST00000636020 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
CLN6-212ENST00000636020 TTLL11Q8NHH1 800 aa23.53■■□□□ 1.36
CLN6-212ENST00000636020 PRO3102Q9H379 93 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms