RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
CHD2-221ENST00000635856 RBM33Q96EV2 1170 aaKnown RBP6.96□□□□□ -1.3
CHD2-221ENST00000635856 HMGB1P1B2RPK0 211 aaPredicted RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 PPP1R12BO60237 982 aaPredicted RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 BRD1O95696 1058 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 CDC25BP30305 580 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 TXLNAP40222 546 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 THEMIS2Q5TEJ8 643 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 KAT2BQ92831 832 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 TRIM11Q96F44 468 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 MTRQ99707 1265 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 ARPC5LQ9BPX5 153 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 MMTAG2Q9BU76 263 aaKnown RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 PARD6BQ9BYG5 372 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 UBAP1Q9NZ09 502 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 LMCD1Q9NZU5 365 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PHLPP2Q6ZVD8 1323 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PSDA5PKW4 1024 aaPredicted RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 APAF1O14727 1248 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PSMC1P62191 440 aaKnown RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 CCDC15Q0P6D6 951 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PDIA5Q14554 519 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PARP9Q8IXQ6 854 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 SYCP3Q8IZU3 236 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 PHC3Q8NDX5 983 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 SUN2Q9UH99 717 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 EIF4G3O43432 1585 aaKnown RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 ATP6V1G1O75348 118 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
CHD2-221ENST00000635856 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
CHD2-221ENST00000635856 UHRF1BP1LA0JNW5 1464 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 MYO1FO00160 1098 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 OLFML1Q6UWY5 402 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 HOOK3Q86VS8 718 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 FUT8Q9BYC5 575 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 ERICH2A1L162 156 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 CWF19L1Q69YN2 538 aaKnown RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 GIGYF2Q6Y7W6 1299 aaKnown RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 CEP57L1Q8IYX8 460 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 KIRREL3Q8IZU9 778 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 DDX27Q96GQ7 796 aaKnown RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 MTA3Q9BTC8 594 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 CWC25Q9NXE8 425 aaPredicted RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 SPATA7Q9P0W8 599 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 FYCO1Q9BQS8 1478 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 TADA3O75528 432 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 GNG11P61952 73 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 CAMK4Q16566 473 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 KBTBD12Q3ZCT8 623 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 KLHL10Q6JEL2 608 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 LMNTD2Q8IXW0 634 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 SMARCC2Q8TAQ2 1214 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 ACTR5Q9H9F9 607 aaPredicted RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 GPRASP1Q5JY77 1395 aa6.94□□□□□ -1.3
CHD2-221ENST00000635856 BLMP54132 1417 aaPredicted RBP6.94□□□□□ -1.3
CHD2-221ENST00000635856 PPFIA3O75145 1194 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 RNF40O75150 1001 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 KRT38O76015 456 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 YY1P25490 414 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 SMTNP53814 917 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 JAKMIP2Q96AA8 810 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 CAPS2Q9BXY5 557 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 PICK1Q9NRD5 415 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 SYNPO2Q9UMS6 1093 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 H3BQF6 201 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 SASH3O75995 380 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 FESP07332 822 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 U2AF1L5P0DN76 240 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 U2AF1Q01081 240 aaKnown RBP eCLIP6.93□□□□□ -1.32e-7■□□□□ 10.6
CHD2-221ENST00000635856 G3BP1Q13283 466 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD2-221ENST00000635856 WLSQ5T9L3 541 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 SYNE3Q6ZMZ3 975 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 NACA2Q9H009 215 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 CBX8Q9HC52 389 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 AATFQ9NY61 560 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD2-221ENST00000635856 ABCF2Q9UG63 623 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 TPCN1Q9ULQ1 816 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 CNPY2Q9Y2B0 182 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 USP27XA6NNY8 438 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 ZSCAN9O15535 394 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 VIL1P09327 827 aaKnown RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 GNAT1P11488 350 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 NUCB1Q02818 461 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 DEUP1Q05D60 604 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 CUL4BQ13620 913 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 PLCB4Q15147 1175 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 KIAA0753Q2KHM9 967 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 TMEM110Q86TL2 294 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 INTS4Q96HW7 963 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms