RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DNAJC10Q8IXB1 793 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 FAM200AQ8TCP9 573 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 UBAC1Q9BSL1 405 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 KIF2AO00139 706 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 RCAN1P53805 252 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 GTF3C6Q969F1 213 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 XAGE2Q96GT9 111 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 GTPBP4Q9BZE4 634 aaKnown RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 PEAK1Q9H792 1746 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 PPP4R3BQ5MIZ7 849 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 PHRF1Q9P1Y6 1649 aaKnown RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 UNC5CLQ8IV45 518 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 A1BGP04217 495 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 KANK3Q6NY19 840 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 PALD1Q9ULE6 856 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 KDM6AO15550 1401 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-210ENST00000635776 LRRC37A3O60309 1634 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 CBFA2T2O43439 604 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 ITGA6P23229 1130 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 OLFM4Q6UX06 510 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 ANKRD18AQ8IVF6 992 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 LRP2BPQ9P2M1 347 aa5.32□□□□□ -1.56
SCN1A-210ENST00000635776 GSTO1P78417 241 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 Q6ZUG5 572 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 IQCA1Q86XH1 822 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 DENND2AQ9ULE3 1009 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 TDO2P48775 406 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-210ENST00000635776 MED23Q9ULK4 1368 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 MYO1BO43795 1136 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ANKRD20A12PQ8NF67 263 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ZPR1O75312 459 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
SCN1A-210ENST00000635776 CTSWP56202 376 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 RTL9Q8NET4 1388 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 PDE8BO95263 885 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 YEATS4O95619 227 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ATP6V1AP38606 617 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 RFX5P48382 616 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-210ENST00000635776 FAM227BQ96M60 508 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 CSF1RP07333 972 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 SLC9C2Q5TAH2 1124 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 NLRP3Q96P20 1036 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ME1P48163 572 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 TPTE2Q6XPS3 522 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 ESR2Q92731 530 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 MTMR6Q9Y217 621 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 MEGF6O75095 1541 aa5.31□□□□□ -1.56
SCN1A-210ENST00000635776 CHD2O14647 1828 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 MRC1P22897 1456 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 PRC1O43663 620 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 MFSD6Q6ZSS7 791 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 PXDNQ92626 1479 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 TPM1P09493 284 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 A0A0D9SFI3 127 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 GOLGA8BA8MQT2 603 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 CD2BP2O95400 341 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 STX1AQ16623 288 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 ZKSCAN5Q9Y2L8 839 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 GNAQP50148 359 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 METAP2P50579 478 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 PTH1RQ03431 593 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 PTPDC1A2A3K4 754 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 GSDMDP57764 484 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 UBE4AQ14139 1066 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 RASEFQ8IZ41 740 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 RAI14Q9P0K7 980 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 ORC3Q9UBD5 711 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 ZBTB43O43298 467 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 STK3Q13188 491 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 NLRP10Q86W26 655 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 HSPD1P10809 573 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 TXLNAP40222 546 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 SSRP1Q08945 709 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 TTLL7Q6ZT98 887 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 NIP7Q9Y221 180 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 FAM177A1Q8N128 213 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 FBXL16Q8N461 479 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 MRPS27Q92552 414 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
SCN1A-210ENST00000635776 RBM28Q9NW13 759 aaKnown RBP5.3□□□□□ -1.56
SCN1A-210ENST00000635776 COL5A2P05997 1499 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 ZNF335Q9H4Z2 1342 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 KLF18A0A0U1RQI7 1052 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 GPTP24298 496 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 TIMM10P62072 90 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PDE4BQ07343 736 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 ALX1Q15699 326 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 RTN4Q9NQC3 1192 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 GOLGA8AA7E2F4 631 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 BAG3O95817 575 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 ME3Q16798 604 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CRNKL1Q9BZJ0 848 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 TRIM5Q9C035 493 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 FAM208AQ9UK61 1670 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 KIF5BP33176 963 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 FOXO4P98177 505 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CTCFLQ8NI51 663 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms