RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-229	ENST00000628515	PTCD1	O75127	700 aa	Known RBP	18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	NWD1	Q149M9	1564 aa		18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	DHX40	Q8IX18	779 aa	Known RBP	18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	LRRN4CL	Q8ND94	238 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	LINS1	Q8NG48	757 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	NFAT5	O94916	1531 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	NEMF	O60524	1076 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	POLR3D	P05423	398 aa	Predicted RBP	18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	CDC25B	P30305	580 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	TERF2	Q15554	542 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	EPHA10	Q5JZY3	1008 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	ERO1A	Q96HE7	468 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	MYD88	Q99836	296 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	IFNK	Q9P0W0	207 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	SPATA31A3	Q5VYP0	1347 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	ADAMTS2	O95450	1211 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	DDX58	O95786	925 aa	Known RBP	18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	TFCP2	Q12800	502 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	PTPN21	Q16825	1174 aa		18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	FAM177A1	Q8N128	213 aa	Predicted RBP	18.81	■□□□□ 0.6
NRXN1-229	ENST00000628515	GIGYF1	O75420	1035 aa	Predicted RBP	18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	NYAP1	Q6ZVC0	841 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	NEUROD6	Q96NK8	337 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	CHMP4A	Q9BY43	222 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	CAVIN2	O95810	425 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	KLHL34	Q8N239	644 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	DBNL	Q9UJU6	430 aa	Known RBP	18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	MED23	Q9ULK4	1368 aa		18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515	MARF1	Q9Y4F3	1742 aa	Known RBP	18.8	■□□□□ 0.6
NRXN1-229	ENST00000628515		A0A0G2JLW4	131 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NUTM2E	B1AL46	878 aa	Predicted RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	CTAGE5	O15320	804 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NEXN	Q0ZGT2	675 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	DBNDD2	Q9BQY9	259 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	RBM6	P78332	1123 aa	Known RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	SARM1	Q6SZW1	724 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NSUN7	Q8NE18	718 aa	Known RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	XPO4	Q9C0E2	1151 aa	Known RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	NAT10	Q9H0A0	1025 aa	Known RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	CACNA1F	O60840	1977 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	COL15A1	P39059	1388 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	HOXB7	P09629	217 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	FAM160A1	Q05DH4	1040 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	STOX1	Q6ZVD7	989 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	ZBTB9	Q96C00	473 aa		18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	ZNF396	Q96N95	335 aa	Predicted RBP	18.79	■□□□□ 0.6
NRXN1-229	ENST00000628515	CYP27B1	O15528	508 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	DPCR1	Q3MIW9	517 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	TMX1	Q9H3N1	280 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	SFPQ	P23246	707 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	STK38	Q15208	465 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	AMOT	Q4VCS5	1084 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	CDK11B	P21127	795 aa	Known RBP	18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	LMOD1	P29536	600 aa	Predicted RBP	18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	RCOR1	Q9UKL0	485 aa		18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515		U3KPZ7	1027 aa	Predicted RBP	18.78	■□□□□ 0.6
NRXN1-229	ENST00000628515	ADD1	P35611	737 aa	Known RBP	18.77	■□□□□ 0.6
NRXN1-229	ENST00000628515	CEMIP	Q8WUJ3	1361 aa		18.77	■□□□□ 0.6
NRXN1-229	ENST00000628515	LMTK3	Q96Q04	1460 aa		18.77	■□□□□ 0.59
NRXN1-229	ENST00000628515	ATP5J2-PTCD1	G3V325	749 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	GOLIM4	O00461	696 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	POLR3G	O15318	223 aa	Predicted RBP	18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	IGKV5-2	P06315	115 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	ARHGAP29	Q52LW3	1261 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	PCDHA7	Q9UN72	937 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	CTDNEP1	O95476	244 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	NDUFA8	P51970	172 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	MCMDC2	Q4G0Z9	681 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	UBE3B	Q7Z3V4	1068 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	MRPS27	Q92552	414 aa	Known RBP	18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	ZNF496	Q96IT1	587 aa	Predicted RBP	18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	DNAI1	Q9UI46	699 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	E4F1	Q66K89	784 aa	Predicted RBP	18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	XAGE3	Q8WTP9	111 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	GPHN	Q9NQX3	736 aa	Predicted RBP	18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	GJB4	Q9NTQ9	266 aa		18.76	■□□□□ 0.59
NRXN1-229	ENST00000628515	GOLGA8F	Q08AF8	430 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	GOLGA8DP	Q0D2H9	430 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	TNNI3K	Q59H18	835 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	PPP1R13B	Q96KQ4	1090 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	RGPD5	Q99666	1765 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	FPGT-TNNI3K	V9GXZ4	949 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	NRDC	O43847	1150 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	GSDMD	P57764	484 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	HSP90AA4P	Q58FG1	418 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	ZNF446	Q9NWS9	450 aa		18.75	■□□□□ 0.59
NRXN1-229	ENST00000628515	CCDC66	A2RUB6	948 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	PHKG2	P15735	406 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	COPS6	Q7L5N1	327 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	NBPF11	Q86T75	865 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	NOL10	Q9BSC4	688 aa	Known RBP	18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	ZNF609	O15014	1411 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	PFKFB2	O60825	505 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	CABP4	P57796	275 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	HAND2	P61296	217 aa		18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	DHX32	Q7L7V1	743 aa	Known RBP	18.74	■□□□□ 0.59
NRXN1-229	ENST00000628515	LRRC37A3	O60309	1634 aa		18.74	■□□□□ 0.59

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