RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 RASSF7Q02833 373 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 TTLL12Q14166 644 aaPredicted RBP9.96□□□□□ -0.82
TCF4-260ENST00000627685 DALRD3Q5D0E6 543 aaKnown RBP9.96□□□□□ -0.82
TCF4-260ENST00000627685 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 C2CD5Q86YS7 1000 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 XAGE3Q8WTP9 111 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
TCF4-260ENST00000627685 IL16Q14005 1332 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 SBF1O95248 1867 aa9.96□□□□□ -0.82
TCF4-260ENST00000627685 TLL1O43897 1013 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 EIF2S2P20042 333 aaKnown RBP9.95□□□□□ -0.82
TCF4-260ENST00000627685 GPTP24298 496 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 OLFM4Q6UX06 510 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 SYNE4Q8N205 404 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 ISCA1Q9BUE6 129 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 SLC24A3Q9HC58 644 aa9.95□□□□□ -0.82
TCF4-260ENST00000627685 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
TCF4-260ENST00000627685 CACNA1SQ13698 1873 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 LTBP3Q9NS15 1303 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 C1QTNF8P60827 252 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 GNAI1P63096 354 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 STYK1Q6J9G0 422 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 PRPF40BQ6NWY9 871 aaKnown RBP9.94□□□□□ -0.82
TCF4-260ENST00000627685 NGEFQ8N5V2 710 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
TCF4-260ENST00000627685 ZNF652Q9Y2D9 606 aa9.94□□□□□ -0.82
TCF4-260ENST00000627685 TRIM66O15016 1216 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 RGS20O76081 388 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
TCF4-260ENST00000627685 AMHR2Q16671 573 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 SLC10A5Q5PT55 438 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 MORN1Q5T089 497 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
TCF4-260ENST00000627685 NBPF5PQ86XG9 351 aaPredicted RBP9.93□□□□□ -0.82
TCF4-260ENST00000627685 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.93□□□□□ -0.82
TCF4-260ENST00000627685 LAS1LQ9Y4W2 734 aaKnown RBP9.93□□□□□ -0.82
TCF4-260ENST00000627685 H0YIN7 160 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 KDM4AO75164 1064 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
TCF4-260ENST00000627685 PDE6BP35913 854 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 GGCXP38435 758 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 KIF6Q6ZMV9 814 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 G2E3Q7L622 706 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
TCF4-260ENST00000627685 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
TCF4-260ENST00000627685 ELL2O00472 640 aaPredicted RBP9.91□□□□□ -0.82
TCF4-260ENST00000627685 TCIRG1Q13488 830 aa9.91□□□□□ -0.82
TCF4-260ENST00000627685 C9orf131Q5VYM1 1079 aa9.91□□□□□ -0.82
TCF4-260ENST00000627685 PLBD2Q8NHP8 589 aa9.91□□□□□ -0.82
TCF4-260ENST00000627685 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
TCF4-260ENST00000627685 SLC27A5Q9Y2P5 690 aa9.91□□□□□ -0.82
TCF4-260ENST00000627685 WDR90Q96KV7 1748 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 ZC3H4Q9UPT8 1303 aaKnown RBP9.9□□□□□ -0.82
TCF4-260ENST00000627685 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 POTECB2RU33 542 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 C21orf2O43822 256 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 VAMP4O75379 141 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 ADH1BP00325 375 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 IGKV5-2P06315 115 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 NPR1P16066 1061 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 ST5P78524 1137 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 TRIM28Q13263 835 aaKnown RBP9.9□□□□□ -0.82
TCF4-260ENST00000627685 WDR63Q8IWG1 891 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 MASTLQ96GX5 879 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 ADAMTSL1Q8N6G6 1762 aa9.9□□□□□ -0.82
TCF4-260ENST00000627685 CALD1Q05682 793 aaKnown RBP9.89□□□□□ -0.83
TCF4-260ENST00000627685 AIMP1Q12904 312 aaKnown RBP9.89□□□□□ -0.83
TCF4-260ENST00000627685 PARP10Q53GL7 1025 aa9.89□□□□□ -0.83
TCF4-260ENST00000627685 TPTE2Q6XPS3 522 aa9.89□□□□□ -0.83
TCF4-260ENST00000627685 ZNF428Q96B54 188 aa9.89□□□□□ -0.83
TCF4-260ENST00000627685 SPSB2Q99619 263 aa9.89□□□□□ -0.83
TCF4-260ENST00000627685 NMRK2Q9NPI5 230 aa9.89□□□□□ -0.83
TCF4-260ENST00000627685 ABCC4O15439 1325 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 TCERG1O14776 1098 aaKnown RBP9.88□□□□□ -0.83
TCF4-260ENST00000627685 S1PR4O95977 384 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 CASP7P55210 303 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
TCF4-260ENST00000627685 TWISTNBQ3B726 338 aaPredicted RBP9.88□□□□□ -0.83
TCF4-260ENST00000627685 TRMT2AQ8IZ69 625 aaKnown RBP9.88□□□□□ -0.83
TCF4-260ENST00000627685 FAM9BQ8IZU0 186 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 CNKSR1Q969H4 720 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 ZNF622Q969S3 477 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■□□□□ 11.2
TCF4-260ENST00000627685 NYXQ9GZU5 481 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 HYPKQ9NX55 129 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 RNF181Q9P0P0 153 aa9.88□□□□□ -0.83
TCF4-260ENST00000627685 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
TCF4-260ENST00000627685 ZNF646O15015 1829 aaPredicted RBP9.87□□□□□ -0.83
TCF4-260ENST00000627685 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
TCF4-260ENST00000627685 CCER2I3L3R5 266 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms