RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 FERMT3Q86UX7 667 aa10.12□□□□□ -0.79
PCDH15-233ENST00000621708 BRF1Q92994 677 aa10.12□□□□□ -0.79
PCDH15-233ENST00000621708 HOOK2Q96ED9 719 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
PCDH15-233ENST00000621708 TANGO6Q9C0B7 1094 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 SH2D4AQ9H788 454 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 GRPEL1Q9HAV7 217 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 RBM28Q9NW13 759 aaKnown RBP10.11□□□□□ -0.79
PCDH15-233ENST00000621708 USP31Q70CQ4 1352 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 MAGEB6Q8N7X4 407 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 QRICH2Q9H0J4 1663 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 B4DLN1 442 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 MRPL12P52815 198 aaKnown RBP10.11□□□□□ -0.79
PCDH15-233ENST00000621708 TBC1D22AQ8WUA7 517 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 SUCLG2Q96I99 432 aa10.11□□□□□ -0.79
PCDH15-233ENST00000621708 PCCAP05165 728 aaPredicted RBP10.11□□□□□ -0.79
PCDH15-233ENST00000621708 H0YIN7 160 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 PRC1O43663 620 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 DHX32Q7L7V1 743 aaKnown RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 APPBP2Q92624 585 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 ERCC4Q92889 916 aaPredicted RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 INTS4Q96HW7 963 aaKnown RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 NAP1L4Q99733 375 aaKnown RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 ERMNQ8TAM6 284 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 CREB3L3Q68CJ9 461 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 KCNG4Q8TDN1 519 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 DESP17661 470 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 TRMT2AQ8IZ69 625 aaKnown RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
PCDH15-233ENST00000621708 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 UFL1O94874 794 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 UBE2HP62256 183 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
PCDH15-233ENST00000621708 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 MAP3K15Q6ZN16 1313 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 BRINP3Q76B58 766 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 XAGE2Q96GT9 111 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 ATL3Q6DD88 541 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 Q6ZUG5 572 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 C16orf71Q8IYS4 520 aaPredicted RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 TMEM87BQ96K49 555 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 LRRIQ1Q96JM4 1722 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 CTSWP56202 376 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 ALG1Q9BT22 464 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 PDE4CQ08493 712 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 FKBP15Q5T1M5 1219 aa10.09□□□□□ -0.79
PCDH15-233ENST00000621708 ZNF335Q9H4Z2 1342 aaPredicted RBP10.09□□□□□ -0.79
PCDH15-233ENST00000621708 PPP2R5BQ15173 497 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 RMND1Q9NWS8 449 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 MCM9Q9NXL9 1143 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 KIAA1210Q9ULL0 1709 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 APBA3O96018 575 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 C8orf34Q49A92 452 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 KBTBD3Q8NAB2 608 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 RUFY1Q96T51 708 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 HCLS1P14317 486 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-233ENST00000621708 ATP5JP18859 108 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-233ENST00000621708 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 FAM114A1Q8IWE2 563 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 KIDINS220Q9ULH0 1771 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 UBA7P41226 1012 aa10.08□□□□□ -0.8
PCDH15-233ENST00000621708 HELBQ8NG08 1087 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-233ENST00000621708 RRP36Q96EU6 259 aaKnown RBP10.08□□□□□ -0.8
PCDH15-233ENST00000621708 IQSEC3Q9UPP2 1182 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-233ENST00000621708 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 SIK1P57059 783 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 GUCY1B3Q02153 619 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 STX1AQ16623 288 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 GPR108Q9NPR9 543 aa10.07□□□□□ -0.8
PCDH15-233ENST00000621708 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
PCDH15-233ENST00000621708 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms