RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LPIN2Q92539 896 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
VTA1-205ENST00000620996 LRRC2Q9BYS8 371 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 HELLSQ9NRZ9 838 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 TRIM37O94972 964 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 LARGE1O95461 756 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 APPP05067 770 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 COL9A3Q14050 684 aaPredicted RBP11.84□□□□□ -0.51
VTA1-205ENST00000620996 CLEC4GQ6UXB4 293 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
VTA1-205ENST00000620996 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
VTA1-205ENST00000620996 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
VTA1-205ENST00000620996 HAND2P61296 217 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 TTC14Q96N46 770 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 CHRNDQ07001 517 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 NEK1Q96PY6 1258 aa11.83□□□□□ -0.52
VTA1-205ENST00000620996 CYP21A2P08686 494 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 BCAMP50895 628 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 CUL4AQ13619 759 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 VPS37DQ86XT2 251 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
VTA1-205ENST00000620996 KRT32Q14532 448 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 TTLL5Q6EMB2 1281 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
VTA1-205ENST00000620996 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 TM6SF1Q9BZW5 370 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 RRAGDQ9NQL2 400 aaPredicted RBP11.82□□□□□ -0.52
VTA1-205ENST00000620996 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
VTA1-205ENST00000620996 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.82□□□□□ -0.52
VTA1-205ENST00000620996 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
VTA1-205ENST00000620996 UQCRFS1P1P0C7P4 283 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
VTA1-205ENST00000620996 TPTE2Q6XPS3 522 aa11.81□□□□□ -0.52
VTA1-205ENST00000620996 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
VTA1-205ENST00000620996 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
VTA1-205ENST00000620996 PUS7LQ9H0K6 701 aaKnown RBP11.81□□□□□ -0.52
VTA1-205ENST00000620996 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
VTA1-205ENST00000620996 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
VTA1-205ENST00000620996 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
VTA1-205ENST00000620996 TPCN1Q9ULQ1 816 aa11.81□□□□□ -0.52
VTA1-205ENST00000620996 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 BTAF1O14981 1849 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 TTF1Q15361 905 aaPredicted RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 ME3Q16798 604 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 Q6ZUG5 572 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 APPBP2Q92624 585 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 MYH3P11055 1940 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 VPS37CA5D8V6 355 aaPredicted RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 GPAA1O43292 621 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ZDHHC9Q9Y397 364 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 WTIPA6NIX2 430 aaPredicted RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
VTA1-205ENST00000620996 GJB2P29033 226 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 GYG1P46976 350 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 RASGRF1Q13972 1273 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 KCNB2Q92953 911 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 IL17RAQ96F46 866 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ARID3AQ99856 593 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
VTA1-205ENST00000620996 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 DSCC1Q9BVC3 393 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
VTA1-205ENST00000620996 LRP2BPQ9P2M1 347 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 ATRNO75882 1429 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
VTA1-205ENST00000620996 EP400Q96L91 3159 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 BRF1Q92994 677 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 AIDAQ96BJ3 306 aa11.79□□□□□ -0.52
VTA1-205ENST00000620996 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
VTA1-205ENST00000620996 PDE6AP16499 860 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 FGFR2P21802 821 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 FOSBP53539 338 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms