RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DISP3Q9P2K9 1392 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 NEDD9Q14511 834 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 BRMS1Q9HCU9 246 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ERICH3Q5RHP9 1530 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 LMNTD2Q8IXW0 634 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 BCAS4Q8TDM0 211 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ROCK1Q13464 1354 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ZBTB16Q05516 673 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 THOC1Q96FV9 657 aaKnown RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 PPP2R2CQ9Y2T4 447 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 ZNF131P52739 623 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 MRPS27Q92552 414 aaKnown RBP5.71□□□□□ -1.5
VPS13D-214ENST00000620676 USP28Q96RU2 1077 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 SAMD15Q9P1V8 674 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 FAM169AQ9Y6X4 670 aa5.71□□□□□ -1.5
VPS13D-214ENST00000620676 FGD6Q6ZV73 1430 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 USP19O94966 1318 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 KANK1Q14678 1352 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TSPY2A6NKD2 308 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ENC1O14682 589 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 JAK2O60674 1132 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TSPY3P0CV98 308 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TSPY8P0CW00 308 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TSPY1Q01534 308 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 NMIQ13287 307 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ZNF365Q70YC5 407 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 UIMC1Q96RL1 719 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 PALD1Q9ULE6 856 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 MYL6BP14649 208 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 CCDC170Q8IYT3 715 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 RASEFQ8IZ41 740 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 CABS1Q96KC9 395 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ATG3Q9NT62 314 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ARAP1Q96P48 1450 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 RTL1A6NKG5 1358 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SLC7A5Q01650 507 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 HSP90AB4PQ58FF6 505 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 LEO1Q8WVC0 666 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 DHX58Q96C10 678 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SNRKQ9NRH2 765 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 AKR1B15C9JRZ8 316 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 CKAP4Q07065 602 aaKnown RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 INF2Q27J81 1249 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SLC4A8Q2Y0W8 1093 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 RUFY3Q7L099 469 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 CCDC155Q8N6L0 562 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 IGSF22Q8N9C0 903 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 STAG1Q8WVM7 1258 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 AIDAQ96BJ3 306 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ZCWPW1Q9H0M4 648 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 IDEP14735 1019 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ARHGAP25P42331 645 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 KRT24Q2M2I5 525 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TCERG1LQ5VWI1 586 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SPATA24Q86W54 205 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SPTLC3Q9NUV7 552 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 USO1O60763 962 aaKnown RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 LBHD1Q9BQE6 289 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SSRP1Q08945 709 aaKnown RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 ARHGEF2Q92974 986 aaKnown RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 FTOQ9C0B1 505 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 BACH1O14867 736 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 SEPT6Q14141 434 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 VPS37DQ86XT2 251 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 TSPYL6Q8N831 410 aa5.7□□□□□ -1.5
VPS13D-214ENST00000620676 GEMIN8Q9NWZ8 242 aaKnown RBP5.7□□□□□ -1.5
VPS13D-214ENST00000620676 NAP1L3Q99457 506 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 MUM1Q2TAK8 710 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 RNF168Q8IYW5 571 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 IGHMBP2P38935 993 aaKnown RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 TOGARAM2Q6ZUX3 1019 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 CEP120Q8N960 986 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 VPS16Q9H269 839 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 MBIPQ9NS73 344 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 LCA5Q86VQ0 697 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 MYZAPP0CAP1 466 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 PSMC4P43686 418 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 CCDC144BQ3MJ40 725 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 Q6ZUG5 572 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 C8orf58Q8NAV2 365 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 CYP2C19P33261 490 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 DYDC2Q96IM9 177 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 AKR1B10O60218 316 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 BRD3Q15059 726 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 LRRC23Q53EV4 343 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 TSC22D3Q99576 134 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 CHMLP26374 656 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 RFC1P35251 1148 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 TDRD12Q587J7 1177 aaKnown RBP5.69□□□□□ -1.5
VPS13D-214ENST00000620676 ZBTB40Q9NUA8 1239 aa5.69□□□□□ -1.5
VPS13D-214ENST00000620676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms