RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 ERBB3P21860 1342 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 NEURL4Q96JN8 1562 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 FANCCQ00597 558 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 GOLPH3LQ9H4A5 285 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 TADA3O75528 432 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 LIG3P49916 1009 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 C3P01024 1663 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
TNFAIP3-210ENST00000620204 H3BQF6 201 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 SLC27A2O14975 620 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 Q6ZUG5 572 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 ECHDC1Q9NTX5 307 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 ERLIN1O75477 346 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 SYNE3Q6ZMZ3 975 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 PI4K2BQ8TCG2 481 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 EXOC4Q96A65 974 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 WDR24Q96S15 920 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 HINFPQ9BQA5 517 aa11.28□□□□□ -0.6
TNFAIP3-210ENST00000620204 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 PPM1EQ8WY54 764 aa11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.6
TNFAIP3-210ENST00000620204 A0A0G2JS52 829 aa11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 DHX58Q96C10 678 aa11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 FAM53CQ9NYF3 392 aa11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 MAGEA9P43362 315 aa11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 CENPHQ9H3R5 247 aa11.27□□□□□ -0.61
TNFAIP3-210ENST00000620204 GUCY2CP25092 1073 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 GEMIN8Q9NWZ8 242 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 IMPACTQ9P2X3 320 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 PPARDQ03181 441 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 MTX1Q13505 466 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 DNAJC21Q5F1R6 531 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 ANKRD20A12PQ8NF67 263 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 SETQ01105 290 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 NBPF11Q86T75 865 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 PPP2R2CQ9Y2T4 447 aa11.26□□□□□ -0.61
TNFAIP3-210ENST00000620204 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 HDXQ7Z353 690 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 CCDC91Q7Z6B0 441 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 UBR1Q8IWV7 1749 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 MAP2K2P36507 400 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 NDUFA8P51970 172 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 PI4KAP2A4QPH2 592 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 CCDC129Q6ZRS4 1044 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 PI4KAP1Q8N8J0 262 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 FUT8Q9BYC5 575 aa11.25□□□□□ -0.61
TNFAIP3-210ENST00000620204 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 A0A0D9SFI3 127 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms