RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CHRNA5P30532 468 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 PARP3Q9Y6F1 533 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
SRRT-216ENST00000618262 NUP98P52948 1817 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 ITGA6P23229 1130 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 LRRC24Q50LG9 513 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
SRRT-216ENST00000618262 UBR3Q6ZT12 1888 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 CAPN2P17655 700 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 RIPOR2Q9Y4F9 1068 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 TM4SF1P30408 202 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 MRE11P49959 708 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 CBX1P83916 185 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 MTA1Q13330 715 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
SRRT-216ENST00000618262 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
SRRT-216ENST00000618262 OTUD7AQ8TE49 926 aaPredicted RBP14.41□□□□□ -0.1
SRRT-216ENST00000618262 RWDD1Q9H446 243 aaPredicted RBP14.41□□□□□ -0.1
SRRT-216ENST00000618262 CTSWP56202 376 aa14.41□□□□□ -0.1
SRRT-216ENST00000618262 PARP10Q53GL7 1025 aa14.41□□□□□ -0.1
SRRT-216ENST00000618262 BSDC1Q9NW68 430 aaPredicted RBP14.41□□□□□ -0.1
SRRT-216ENST00000618262 R3HCC1Q9Y3T6 440 aaKnown RBP14.41□□□□□ -0.1
SRRT-216ENST00000618262 TAF5LO75529 589 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 ATP8B2P98198 1209 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 CELF1Q92879 486 aaKnown RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.4□□□□□ -0.13e-7■■■■■ 139.6
SRRT-216ENST00000618262 CACNA1FO60840 1977 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 NLRP3Q96P20 1036 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 A0A0G2JLW4 131 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 IFIT5Q13325 482 aaKnown RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 MYBPC2Q14324 1141 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 ZNF771Q7L3S4 317 aaPredicted RBP14.4□□□□□ -0.1
SRRT-216ENST00000618262 FLAD1Q8NFF5 587 aa14.4□□□□□ -0.1
SRRT-216ENST00000618262 CCDC66A2RUB6 948 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 PDE8AO60658 829 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 NUP188Q5SRE5 1749 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 ST5P78524 1137 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 ANKRD23Q86SG2 305 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 TSPAN18Q96SJ8 248 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 TUBGCP6Q96RT7 1819 aa14.39□□□□□ -0.11
SRRT-216ENST00000618262 LDHAL6AQ6ZMR3 332 aa14.38□□□□□ -0.11
SRRT-216ENST00000618262 TIGD1Q96MW7 591 aa14.38□□□□□ -0.11
SRRT-216ENST00000618262 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
SRRT-216ENST00000618262 CNNM1Q9NRU3 951 aa14.38□□□□□ -0.11
SRRT-216ENST00000618262 HDAC1Q13547 482 aaPredicted RBP14.38□□□□□ -0.11
SRRT-216ENST00000618262 PDZRN3Q9UPQ7 1066 aa14.38□□□□□ -0.11
SRRT-216ENST00000618262 NRDCO43847 1150 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 SCP2P22307 547 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
SRRT-216ENST00000618262 RPAP2Q8IXW5 612 aaPredicted RBP14.37□□□□□ -0.11
SRRT-216ENST00000618262 NCAPGQ9BPX3 1015 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 PXDNLA1KZ92 1463 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
SRRT-216ENST00000618262 NYXQ9GZU5 481 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
SRRT-216ENST00000618262 NDUFB9Q9Y6M9 179 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 TAF1P21675 1872 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 GOLGA6CA6NDK9 693 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 GOLGA6BA6NDN3 693 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 GOLGA6DP0CG33 693 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
SRRT-216ENST00000618262 GOLGA6AQ9NYA3 693 aa14.37□□□□□ -0.11
SRRT-216ENST00000618262 UTYO14607 1347 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 HMMRO75330 724 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 TIMM10P62072 90 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 NEUROD6Q96NK8 337 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 MAP4K4O95819 1239 aaPredicted RBP14.36□□□□□ -0.11
SRRT-216ENST00000618262 TFCP2Q12800 502 aa14.36□□□□□ -0.11
SRRT-216ENST00000618262 G3BP1Q13283 466 aaKnown RBP eCLIP14.36□□□□□ -0.113e-7■■■■□ 21.5
SRRT-216ENST00000618262 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 ATL2Q8NHH9 583 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 CCDC97Q96F63 343 aaPredicted RBP14.35□□□□□ -0.11
SRRT-216ENST00000618262 TULP2O00295 520 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 SSH3Q8TE77 659 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 TLR7Q9NYK1 1049 aaKnown RBP14.35□□□□□ -0.11
SRRT-216ENST00000618262 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 COL4A1P02462 1669 aa14.35□□□□□ -0.11
SRRT-216ENST00000618262 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
SRRT-216ENST00000618262 RFX5P48382 616 aaPredicted RBP14.34□□□□□ -0.11
SRRT-216ENST00000618262 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
SRRT-216ENST00000618262 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 ITFG2Q969R8 447 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 JAG2Q9Y219 1238 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 RREB1Q92766 1687 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 SASH1O94885 1247 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 MTFR1LQ9H019 292 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
SRRT-216ENST00000618262 TNNT3P45378 269 aaPredicted RBP14.33□□□□□ -0.12
SRRT-216ENST00000618262 RABL6Q3YEC7 729 aaPredicted RBP14.33□□□□□ -0.12
SRRT-216ENST00000618262 METTL24Q5JXM2 366 aa14.33□□□□□ -0.12
SRRT-216ENST00000618262 CENPQQ7L2Z9 268 aaPredicted RBP14.33□□□□□ -0.12
SRRT-216ENST00000618262 DCTPP1Q9H773 170 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms