RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 NBPF7P0C2Y1 421 aaPredicted RBP28.26■■■□□ 2.11
ARHGEF1-223ENST00000617585 HSPA1AP0DMV8 641 aaKnown RBP28.26■■■□□ 2.11
ARHGEF1-223ENST00000617585 HSPA1BP0DMV9 641 aaKnown RBP28.26■■■□□ 2.11
ARHGEF1-223ENST00000617585 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
ARHGEF1-223ENST00000617585 BRPF1P55201 1214 aaPredicted RBP28.25■■■□□ 2.11
ARHGEF1-223ENST00000617585 SUCLG2Q96I99 432 aa28.25■■■□□ 2.11
ARHGEF1-223ENST00000617585 TLL2Q9Y6L7 1015 aa28.25■■■□□ 2.11
ARHGEF1-223ENST00000617585 THSD7BQ9C0I4 1608 aa28.25■■■□□ 2.11
ARHGEF1-223ENST00000617585 KIF4BQ2VIQ3 1234 aa28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 RABL6Q3YEC7 729 aaPredicted RBP28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 DACT2Q5SW24 774 aa28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 STRIP1Q5VSL9 837 aa28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 ABT1Q9ULW3 272 aaKnown RBP28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 CHMP3Q9Y3E7 222 aa28.24■■■□□ 2.11
ARHGEF1-223ENST00000617585 MYO3BQ8WXR4 1341 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 USP17L8P0C7I0 530 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 KLRK1P26718 216 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 MMP14P50281 582 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 LDHAL6AQ6ZMR3 332 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 HHIPL1Q96JK4 782 aa28.22■■■□□ 2.11
ARHGEF1-223ENST00000617585 CELF2O95319 508 aaKnown RBP28.21■■■□□ 2.11
ARHGEF1-223ENST00000617585 SAPCD2Q86UD0 394 aa28.21■■■□□ 2.11
ARHGEF1-223ENST00000617585 ZNF594Q96JF6 807 aaPredicted RBP28.21■■■□□ 2.11
ARHGEF1-223ENST00000617585 WDR33Q9C0J8 1336 aaKnown RBP28.2■■■□□ 2.11
ARHGEF1-223ENST00000617585 TAF5LO75529 589 aa28.2■■■□□ 2.1
ARHGEF1-223ENST00000617585 RBM26Q5T8P6 1007 aaKnown RBP28.2■■■□□ 2.1
ARHGEF1-223ENST00000617585 USP48Q86UV5 1035 aa28.2■■■□□ 2.1
ARHGEF1-223ENST00000617585 USP44Q9H0E7 712 aa28.2■■■□□ 2.1
ARHGEF1-223ENST00000617585 SMC4Q9NTJ3 1288 aa28.2■■■□□ 2.1
ARHGEF1-223ENST00000617585 KCNJ4P48050 445 aa28.19■■■□□ 2.1
ARHGEF1-223ENST00000617585 DCPSQ96C86 337 aaKnown RBP28.19■■■□□ 2.1
ARHGEF1-223ENST00000617585 CD209Q9NNX6 404 aa28.19■■■□□ 2.1
ARHGEF1-223ENST00000617585 MYOZ2Q9NPC6 264 aa28.19■■■□□ 2.1
ARHGEF1-223ENST00000617585 SNAP23O00161 211 aa28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 TAF7LQ5H9L4 462 aa28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 IFFO2Q5TF58 517 aa28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 KRT26Q7Z3Y9 468 aa28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 ANKRD44Q8N8A2 993 aa28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 HELBQ8NG08 1087 aaPredicted RBP28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 BICC1Q9H694 974 aaKnown RBP28.18■■■□□ 2.1
ARHGEF1-223ENST00000617585 ECE1P42892 770 aa28.17■■■□□ 2.1
ARHGEF1-223ENST00000617585 TTLL5Q6EMB2 1281 aa28.17■■■□□ 2.1
ARHGEF1-223ENST00000617585 CNNM1Q9NRU3 951 aa28.17■■■□□ 2.1
ARHGEF1-223ENST00000617585 IL1R1P14778 569 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 SCARF1Q14162 830 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 CAPNS2Q96L46 248 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 WBP1LQ9NX94 342 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 GGA3Q9NZ52 723 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 PITPNM2Q9BZ72 1349 aa28.16■■■□□ 2.1
ARHGEF1-223ENST00000617585 RIPOR2Q9Y4F9 1068 aa28.15■■■□□ 2.1
ARHGEF1-223ENST00000617585 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
ARHGEF1-223ENST00000617585 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.1
ARHGEF1-223ENST00000617585 MXD3Q9BW11 206 aa28.14■■■□□ 2.1
ARHGEF1-223ENST00000617585 ASTN2O75129 1339 aaPredicted RBP28.14■■■□□ 2.09
ARHGEF1-223ENST00000617585 RARSP54136 660 aaKnown RBP28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 COL13A1Q5TAT6 717 aaPredicted RBP28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 CYP4F22Q6NT55 531 aa28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 MIER1Q8N108 512 aa28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 OGFOD1Q8N543 542 aa28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 PUS3Q9BZE2 481 aaKnown RBP28.13■■■□□ 2.09
ARHGEF1-223ENST00000617585 ADM5C9JUS6 153 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 GTF2IP78347 998 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 DLK2Q6UY11 383 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 ZNF804AQ7Z570 1209 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 SULF1Q8IWU6 871 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 NOB1Q9ULX3 412 aaKnown RBP28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 MROH5Q6ZUA9 1318 aa28.12■■■□□ 2.09
ARHGEF1-223ENST00000617585 FKBP1AP62942 108 aaKnown RBP28.11■■■□□ 2.09
ARHGEF1-223ENST00000617585 MAP2K1Q02750 393 aaPredicted RBP28.11■■■□□ 2.09
ARHGEF1-223ENST00000617585 ANGEL2Q5VTE6 544 aaKnown RBP28.11■■■□□ 2.09
ARHGEF1-223ENST00000617585 API5Q9BZZ5 524 aaKnown RBP28.11■■■□□ 2.09
ARHGEF1-223ENST00000617585 ZNF408Q9H9D4 720 aa28.11■■■□□ 2.09
ARHGEF1-223ENST00000617585 FOXN1O15353 648 aa28.1■■■□□ 2.09
ARHGEF1-223ENST00000617585 MAP2K2P36507 400 aa28.1■■■□□ 2.09
ARHGEF1-223ENST00000617585 ARHGAP45Q92619 1136 aa28.1■■■□□ 2.09
ARHGEF1-223ENST00000617585 WNT10BO00744 389 aa28.09■■■□□ 2.09
ARHGEF1-223ENST00000617585 FBXW7Q969H0 707 aa28.09■■■□□ 2.09
ARHGEF1-223ENST00000617585 ZBED3Q96IU2 234 aaPredicted RBP28.09■■■□□ 2.09
ARHGEF1-223ENST00000617585 PLIN1O60240 522 aa28.08■■■□□ 2.09
ARHGEF1-223ENST00000617585 NBPF9Q3BBW0 867 aa28.08■■■□□ 2.09
ARHGEF1-223ENST00000617585 GBA2Q9HCG7 927 aaPredicted RBP28.08■■■□□ 2.09
ARHGEF1-223ENST00000617585 ECM29Q5VYK3 1845 aa28.08■■■□□ 2.09
ARHGEF1-223ENST00000617585 CERS5Q8N5B7 392 aa28.07■■■□□ 2.08
ARHGEF1-223ENST00000617585 VGLL2Q8N8G2 317 aa28.07■■■□□ 2.08
ARHGEF1-223ENST00000617585 CDCA5Q96FF9 252 aa28.07■■■□□ 2.08
ARHGEF1-223ENST00000617585 HDAC9Q9UKV0 1011 aa28.07■■■□□ 2.08
ARHGEF1-223ENST00000617585 SASH1O94885 1247 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 RFX5P48382 616 aaPredicted RBP28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 LRRC24Q50LG9 513 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 KIAA0825Q8IV33 1275 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 C2orf69Q8N8R5 385 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 TDRD7Q8NHU6 1098 aaKnown RBP28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 AIDAQ96BJ3 306 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 PRDM10Q9NQV6 1147 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 FAM205AQ6ZU69 1335 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 KIF16BQ96L93 1317 aa28.06■■■□□ 2.08
ARHGEF1-223ENST00000617585 CTCFP49711 727 aaPredicted RBP28.05■■■□□ 2.08
ARHGEF1-223ENST00000617585 HUNKP57058 714 aa28.05■■■□□ 2.08
ARHGEF1-223ENST00000617585 PAXIP1Q6ZW49 1069 aaPredicted RBP28.05■■■□□ 2.08
ARHGEF1-223ENST00000617585 MTMR14Q8NCE2 650 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms