RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CCAR1Q8IX12 1150 aaKnown RBP13.86□□□□□ -0.19
C11orf54-215ENST00000617482 ALS2Q96Q42 1657 aa13.86□□□□□ -0.19
C11orf54-215ENST00000617482 EYA2O00167 538 aa13.86□□□□□ -0.19
C11orf54-215ENST00000617482 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
C11orf54-215ENST00000617482 TDRD7Q8NHU6 1098 aaKnown RBP13.86□□□□□ -0.19
C11orf54-215ENST00000617482 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
C11orf54-215ENST00000617482 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
C11orf54-215ENST00000617482 A0A087WWV3 80 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 MTERF4Q7Z6M4 381 aaKnown RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 PLA2G4DQ86XP0 818 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 GOLPH3LQ9H4A5 285 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 MAST3O60307 1309 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 MST1RQ04912 1400 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 M0R2C6 588 aa13.85□□□□□ -0.19
C11orf54-215ENST00000617482 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-215ENST00000617482 HAND2P61296 217 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 GPR108Q9NPR9 543 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
C11orf54-215ENST00000617482 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
C11orf54-215ENST00000617482 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-215ENST00000617482 C11orf57Q6ZUT1 292 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-215ENST00000617482 ERCC4Q92889 916 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-215ENST00000617482 AGXT2Q9BYV1 514 aa13.84□□□□□ -0.19
C11orf54-215ENST00000617482 ME1P48163 572 aa13.83□□□□□ -0.19
C11orf54-215ENST00000617482 SNW1Q13573 536 aaKnown RBP13.83□□□□□ -0.19
C11orf54-215ENST00000617482 GORABQ5T7V8 394 aa13.83□□□□□ -0.19
C11orf54-215ENST00000617482 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.19
C11orf54-215ENST00000617482 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.19
C11orf54-215ENST00000617482 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.19
C11orf54-215ENST00000617482 FBXW7Q969H0 707 aa13.83□□□□□ -0.19
C11orf54-215ENST00000617482 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 WASHC4Q2M389 1173 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 OTUD7BQ6GQQ9 843 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.2
C11orf54-215ENST00000617482 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
C11orf54-215ENST00000617482 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 ADORA1P30542 326 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 IQCB1Q15051 598 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC144BQ3MJ40 725 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC73Q6ZRK6 1079 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 TOM1L2Q6ZVM7 507 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC144CPQ8IYA2 1237 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 ZNF274Q96GC6 653 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 FDPSP14324 419 aaKnown RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 HSPA2P54652 639 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 CACTINQ8WUQ7 758 aaKnown RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 ZNF396Q96N95 335 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-215ENST00000617482 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 COL18A1P39060 1754 aa13.82□□□□□ -0.2
C11orf54-215ENST00000617482 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
C11orf54-215ENST00000617482 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.81□□□□□ -0.2
C11orf54-215ENST00000617482 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 SALL1Q9NSC2 1324 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 SCARF1Q14162 830 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 STX1AQ16623 288 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC158Q5M9N0 1113 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 XAGE2Q96GT9 111 aa13.81□□□□□ -0.2
C11orf54-215ENST00000617482 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 BECN2A8MW95 431 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 CTAGE5O15320 804 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 CIAO1O76071 339 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 CAVIN2O95810 425 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
C11orf54-215ENST00000617482 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 ARID5BQ14865 1188 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 FOXP2O15409 715 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 FGAP02671 866 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
C11orf54-215ENST00000617482 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 CCDC94Q9BW85 323 aaPredicted RBP13.79□□□□□ -0.2
C11orf54-215ENST00000617482 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms