RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 ALDH8A1Q9H2A2 487 aaPredicted RBP21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 TAF6LQ9Y6J9 622 aa21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 SLFNL1Q499Z3 407 aa21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 NARFQ9UHQ1 456 aa21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.37■■□□□ 1.01
SEMA6C-209ENST00000613223 BRD1O95696 1058 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 IGHMBP2P38935 993 aaKnown RBP21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 ANKRD1Q15327 319 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 MYH7P12883 1935 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 GNPATO15228 680 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 UQCRFS1P1P0C7P4 283 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 SLC5A1P13866 664 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 ARID4AP29374 1257 aaPredicted RBP21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 RRAGDQ9NQL2 400 aaPredicted RBP21.36■■□□□ 1.01
SEMA6C-209ENST00000613223 TAF1LQ8IZX4 1826 aa21.35■■□□□ 1.01
SEMA6C-209ENST00000613223 CCDC102BQ68D86 513 aa21.35■■□□□ 1.01
SEMA6C-209ENST00000613223 PI16Q6UXB8 463 aa21.35■■□□□ 1.01
SEMA6C-209ENST00000613223 SEPT12Q8IYM1 358 aa21.35■■□□□ 1.01
SEMA6C-209ENST00000613223 LARP6Q9BRS8 491 aaKnown RBP21.35■■□□□ 1.01
SEMA6C-209ENST00000613223 M0R2C6 588 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 LARGE1O95461 756 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 CYP21A2P08686 494 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 TTF1Q15361 905 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 ERFEQ4G0M1 354 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 HELBQ8NG08 1087 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 OSBP2Q969R2 916 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 PHKA1P46020 1223 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 APPBP2Q92624 585 aa21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 CDC5LQ99459 802 aaKnown RBP21.34■■□□□ 1.01
SEMA6C-209ENST00000613223 SF3B3Q15393 1217 aaKnown RBP21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 NEK1Q96PY6 1258 aa21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 PANK2Q9BZ23 570 aa21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 RTCBQ9Y3I0 505 aaKnown RBP21.33■■□□□ 1.01
SEMA6C-209ENST00000613223 COL9A3Q14050 684 aaPredicted RBP21.32■■□□□ 1
SEMA6C-209ENST00000613223 WASHC4Q2M389 1173 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 ZPR1O75312 459 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 ME3Q16798 604 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 MCTP1Q6DN14 999 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 NYXQ9GZU5 481 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 TPCN1Q9ULQ1 816 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 SMC3Q9UQE7 1217 aa21.32■■□□□ 1
SEMA6C-209ENST00000613223 SLC10A5Q5PT55 438 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 BICDL1Q6ZP65 573 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 SMIM5Q71RC9 77 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 CCDC83Q8IWF9 413 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
SEMA6C-209ENST00000613223 C4BP0C0L5 1744 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 CASZ1Q86V15 1759 aa21.31■■□□□ 1
SEMA6C-209ENST00000613223 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
SEMA6C-209ENST00000613223 HMGB1P09429 215 aaKnown RBP21.3■■□□□ 1
SEMA6C-209ENST00000613223 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
SEMA6C-209ENST00000613223 SETDB2Q96T68 719 aa21.3■■□□□ 1
SEMA6C-209ENST00000613223 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
SEMA6C-209ENST00000613223 GTF2E1P29083 439 aaPredicted RBP21.29■■□□□ 1
SEMA6C-209ENST00000613223 ADD2P35612 726 aa21.29■■□□□ 1
SEMA6C-209ENST00000613223 CHRNDQ07001 517 aa21.29■■□□□ 1
SEMA6C-209ENST00000613223 C3orf67Q6ZVT6 689 aa21.29■■□□□ 1
SEMA6C-209ENST00000613223 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
SEMA6C-209ENST00000613223 COL4A1P02462 1669 aa21.29■■□□□ 1
SEMA6C-209ENST00000613223 ST3GAL1Q11201 340 aa21.28■■□□□ 1
SEMA6C-209ENST00000613223 STOX1Q6ZVD7 989 aa21.28■■□□□ 1
SEMA6C-209ENST00000613223 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
SEMA6C-209ENST00000613223 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 FOXD4L5Q5VV16 416 aaPredicted RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 FOXD4L4Q8WXT5 416 aaPredicted RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 QTRT2Q9H974 415 aaKnown RBP21.28■■□□□ 1
SEMA6C-209ENST00000613223 CTNNA3Q9UI47 895 aa21.28■■□□□ 1
SEMA6C-209ENST00000613223 C4AP0C0L4 1744 aa21.28■■□□□ 1
SEMA6C-209ENST00000613223 UBE3CQ15386 1083 aa21.27■■□□□ 1
SEMA6C-209ENST00000613223 SPATA5Q8NB90 893 aa21.27■■□□□ 1
SEMA6C-209ENST00000613223 A0A1B0GUL6 1792 aa21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 LAMA4Q16363 1823 aa21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 SLC9C2Q5TAH2 1124 aa21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 AMIGO3Q86WK7 504 aa21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 NBPF5PQ86XG9 351 aaPredicted RBP21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 LMBRD1Q9NUN5 540 aa21.27■□□□□ 0.99
SEMA6C-209ENST00000613223 SNAP23O00161 211 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 FOXP2O15409 715 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 GPAA1O43292 621 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 IDH1O75874 414 aaKnown RBP21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 GJB2P29033 226 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 RASGRF1Q13972 1273 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 KLHL40Q2TBA0 621 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 NECAB1Q8N987 351 aa21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 BSDC1Q9NW68 430 aaPredicted RBP21.26■□□□□ 0.99
SEMA6C-209ENST00000613223 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
SEMA6C-209ENST00000613223 MYO5AQ9Y4I1 1855 aaKnown RBP21.25■□□□□ 0.99
SEMA6C-209ENST00000613223 E7EWF7 191 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms