RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 RXRBP28702 533 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-219ENST00000606715 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 CCDC113Q9H0I3 377 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 GCC2Q8IWJ2 1684 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 MCMDC2Q4G0Z9 681 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 MTERF4Q7Z6M4 381 aaKnown RBP12.62□□□□□ -0.39
SHANK2-219ENST00000606715 C6orf50Q9HD87 102 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 PTPRTO14522 1441 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 BMP15O95972 392 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 HAND2P61296 217 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 APBB1IPQ7Z5R6 666 aaPredicted RBP12.62□□□□□ -0.39
SHANK2-219ENST00000606715 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 CTAGE5O15320 804 aa12.62□□□□□ -0.39
SHANK2-219ENST00000606715 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
SHANK2-219ENST00000606715 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
SHANK2-219ENST00000606715 FILIP1Q7Z7B0 1213 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 MICU3Q86XE3 530 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 PDE1AP54750 535 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
SHANK2-219ENST00000606715 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHANK2-219ENST00000606715 DNA2P51530 1060 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
SHANK2-219ENST00000606715 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 METTL22Q9BUU2 404 aaPredicted RBP12.61□□□□□ -0.39
SHANK2-219ENST00000606715 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 CALM1P0DP23 149 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 CALM2P0DP24 149 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 CALM3P0DP25 149 aa12.61□□□□□ -0.39
SHANK2-219ENST00000606715 KRT13P13646 458 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 FERP16591 822 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 ARL1P40616 181 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-219ENST00000606715 WTAPQ15007 396 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 HEATR3Q7Z4Q2 680 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
SHANK2-219ENST00000606715 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 RAD50Q92878 1312 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-219ENST00000606715 USO1O60763 962 aaKnown RBP12.6□□□□□ -0.39
SHANK2-219ENST00000606715 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 DPH6Q7L8W6 267 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 MYOM2P54296 1465 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
SHANK2-219ENST00000606715 MAST3O60307 1309 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 H0YIN7 160 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 CHL1O00533 1208 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 KIF22Q14807 665 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 FAM114A1Q8IWE2 563 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
SHANK2-219ENST00000606715 BACH1O14867 736 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
SHANK2-219ENST00000606715 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 PDE8AO60658 829 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 PDE6BP35913 854 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 CAMK4Q16566 473 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 CLASP1Q7Z460 1538 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 MAGEB6P1A0A0J9YX57 407 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 SP4Q02446 784 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 BIRC2Q13490 618 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
SHANK2-219ENST00000606715 A2ML1A8K2U0 1454 aa12.58□□□□□ -0.39
SHANK2-219ENST00000606715 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-219ENST00000606715 YEATS4O95619 227 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
SHANK2-219ENST00000606715 NAPAP54920 295 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 ANO10Q9NW15 660 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 RNF113AO15541 343 aaKnown RBP12.58□□□□□ -0.4
SHANK2-219ENST00000606715 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-219ENST00000606715 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
SHANK2-219ENST00000606715 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-219ENST00000606715 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 RBM10P98175 930 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms