RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 C15orf52Q6ZUT6 534 aaKnown RBP25■■□□□ 1.59
SSBP4-210ENST00000601444 EPS15P42566 896 aa24.99■■□□□ 1.59
SSBP4-210ENST00000601444 UBE4AQ14139 1066 aa24.99■■□□□ 1.59
SSBP4-210ENST00000601444 PODNQ7Z5L7 613 aa24.99■■□□□ 1.59
SSBP4-210ENST00000601444 C16orf71Q8IYS4 520 aaPredicted RBP24.99■■□□□ 1.59
SSBP4-210ENST00000601444 COA1Q9GZY4 146 aa24.99■■□□□ 1.59
SSBP4-210ENST00000601444 TAF1DQ9H5J8 278 aaPredicted RBP24.99■■□□□ 1.59
SSBP4-210ENST00000601444 HACL1Q9UJ83 578 aa24.99■■□□□ 1.59
SSBP4-210ENST00000601444 SCN9AQ15858 1988 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 IQCA1LA6NCM1 817 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 CIAO1O76071 339 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 TOMM70O94826 608 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 POTEIP0CG38 1075 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 POTEJP0CG39 1038 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 ATP8B2P98198 1209 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 DDX19BQ9UMR2 479 aa24.98■■□□□ 1.59
SSBP4-210ENST00000601444 SHTN1A0MZ66 631 aa24.97■■□□□ 1.59
SSBP4-210ENST00000601444 RRP1P56182 461 aaKnown RBP24.97■■□□□ 1.59
SSBP4-210ENST00000601444 CD209Q9NNX6 404 aa24.97■■□□□ 1.59
SSBP4-210ENST00000601444 FBXO3Q9UK99 471 aa24.97■■□□□ 1.59
SSBP4-210ENST00000601444 VIL1P09327 827 aaKnown RBP24.96■■□□□ 1.59
SSBP4-210ENST00000601444 EPHX2P34913 555 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 GYG1P46976 350 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 C1QTNF8P60827 252 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 POLA2Q14181 598 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 ZBTB40Q9NUA8 1239 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 GPRC5DQ9NZD1 345 aa24.96■■□□□ 1.59
SSBP4-210ENST00000601444 IL15P40933 162 aaPredicted RBP24.95■■□□□ 1.58
SSBP4-210ENST00000601444 CEP85Q6P2H3 762 aa24.95■■□□□ 1.58
SSBP4-210ENST00000601444 SSH3Q8TE77 659 aa24.95■■□□□ 1.58
SSBP4-210ENST00000601444 FAM84BQ96KN1 310 aaPredicted RBP24.95■■□□□ 1.58
SSBP4-210ENST00000601444 MXD3Q9BW11 206 aa24.95■■□□□ 1.58
SSBP4-210ENST00000601444 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.95■■□□□ 1.58
SSBP4-210ENST00000601444 USP17L3A6NCW0 530 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 USP17L4A6NCW7 530 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 FGFR2P21802 821 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 LMOD1P29536 600 aaPredicted RBP24.94■■□□□ 1.58
SSBP4-210ENST00000601444 USP17L1Q7RTZ2 530 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 FBXW7Q969H0 707 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 CEP126Q9P2H0 1117 aa24.94■■□□□ 1.58
SSBP4-210ENST00000601444 SCN4AP35499 1836 aa24.93■■□□□ 1.58
SSBP4-210ENST00000601444 PUM3Q15397 648 aaKnown RBP24.93■■□□□ 1.58
SSBP4-210ENST00000601444 EAPPQ56P03 285 aaPredicted RBP24.93■■□□□ 1.58
SSBP4-210ENST00000601444 ZNF804AQ7Z570 1209 aa24.93■■□□□ 1.58
SSBP4-210ENST00000601444 CNOT7Q9UIV1 285 aaKnown RBP24.93■■□□□ 1.58
SSBP4-210ENST00000601444 GTF2IP78347 998 aa24.92■■□□□ 1.58
SSBP4-210ENST00000601444 DACT2Q5SW24 774 aa24.92■■□□□ 1.58
SSBP4-210ENST00000601444 RSBN1LQ6PCB5 846 aaPredicted RBP24.92■■□□□ 1.58
SSBP4-210ENST00000601444 RBM46Q8TBY0 533 aaKnown RBP24.92■■□□□ 1.58
SSBP4-210ENST00000601444 IL1R1P14778 569 aa24.91■■□□□ 1.58
SSBP4-210ENST00000601444 HIBADHP31937 336 aaKnown RBP24.91■■□□□ 1.58
SSBP4-210ENST00000601444 TFCP2Q12800 502 aa24.91■■□□□ 1.58
SSBP4-210ENST00000601444 TTLL5Q6EMB2 1281 aa24.91■■□□□ 1.58
SSBP4-210ENST00000601444 MICALL2Q8IY33 904 aa24.91■■□□□ 1.58
SSBP4-210ENST00000601444 JAG2Q9Y219 1238 aa24.91■■□□□ 1.58
SSBP4-210ENST00000601444 BCAMP50895 628 aa24.9■■□□□ 1.58
SSBP4-210ENST00000601444 STRIP1Q5VSL9 837 aa24.9■■□□□ 1.58
SSBP4-210ENST00000601444 FBXO33Q7Z6M2 555 aa24.9■■□□□ 1.58
SSBP4-210ENST00000601444 DPF2Q92785 391 aa24.9■■□□□ 1.58
SSBP4-210ENST00000601444 IFIT1P09914 478 aaKnown RBP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 RPS12P25398 132 aaKnown RBP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 G3BP1Q13283 466 aaKnown RBP eCLIP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 ATP2B3Q16720 1220 aa24.89■■□□□ 1.58
SSBP4-210ENST00000601444 SIRT2Q8IXJ6 389 aa24.89■■□□□ 1.58
SSBP4-210ENST00000601444 TDRD7Q8NHU6 1098 aaKnown RBP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 LPIN2Q92539 896 aa24.89■■□□□ 1.58
SSBP4-210ENST00000601444 GMLQ99445 158 aa24.89■■□□□ 1.58
SSBP4-210ENST00000601444 ADARB2Q9NS39 739 aaKnown RBP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 IQSEC3Q9UPP2 1182 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-210ENST00000601444 SURF6O75683 361 aaKnown RBP24.88■■□□□ 1.57
SSBP4-210ENST00000601444 SASH1O94885 1247 aa24.88■■□□□ 1.57
SSBP4-210ENST00000601444 SLC5A1P13866 664 aa24.88■■□□□ 1.57
SSBP4-210ENST00000601444 SAMD7Q7Z3H4 446 aa24.88■■□□□ 1.57
SSBP4-210ENST00000601444 PNMA8AQ86V59 439 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-210ENST00000601444 ZNF646O15015 1829 aaPredicted RBP24.87■■□□□ 1.57
SSBP4-210ENST00000601444 EGFRP00533 1210 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 HIRAP54198 1017 aaPredicted RBP24.87■■□□□ 1.57
SSBP4-210ENST00000601444 TIMM10P62072 90 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 CAVIN4Q5BKX8 364 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 SMC1BQ8NDV3 1235 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 AGBL3Q8NEM8 1001 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 TRPM4Q8TD43 1214 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 CLEC11AQ9Y240 323 aa24.87■■□□□ 1.57
SSBP4-210ENST00000601444 PSME4Q14997 1843 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 H7C1D1 291 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 ADORA1P30542 326 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 USP50Q70EL3 339 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-210ENST00000601444 LDHDQ86WU2 507 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 VPS37DQ86XT2 251 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 CERS5Q8N5B7 392 aa24.86■■□□□ 1.57
SSBP4-210ENST00000601444 CHMP4BQ9H444 224 aaKnown RBP24.86■■□□□ 1.57
SSBP4-210ENST00000601444 TBC1D10BQ4KMP7 808 aaPredicted RBP24.85■■□□□ 1.57
SSBP4-210ENST00000601444 RBM26Q5T8P6 1007 aaKnown RBP24.85■■□□□ 1.57
SSBP4-210ENST00000601444 CHADLQ6NUI6 762 aa24.85■■□□□ 1.57
SSBP4-210ENST00000601444 RPAP2Q8IXW5 612 aaPredicted RBP24.85■■□□□ 1.57
SSBP4-210ENST00000601444 NOP58Q9Y2X3 529 aaKnown RBP24.85■■□□□ 1.57
SSBP4-210ENST00000601444 FSTL1Q12841 308 aa24.84■■□□□ 1.57
SSBP4-210ENST00000601444 CRBNQ96SW2 442 aa24.84■■□□□ 1.57
SSBP4-210ENST00000601444 ZNF609O15014 1411 aa24.84■■□□□ 1.57
SSBP4-210ENST00000601444 ADAMTSL1Q8N6G6 1762 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms