RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PAG1Q9NWQ8 432 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 PARP3Q9Y6F1 533 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 SPEF2Q9C093 1822 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 RAD50Q92878 1312 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
IRF3-229ENST00000601373 MCCP23508 829 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 GRAPQ13588 217 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
IRF3-229ENST00000601373 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
IRF3-229ENST00000601373 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
IRF3-229ENST00000601373 TAF5LO75529 589 aa16.56■□□□□ 0.24
IRF3-229ENST00000601373 HSPA6P17066 643 aa16.56■□□□□ 0.24
IRF3-229ENST00000601373 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
IRF3-229ENST00000601373 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
IRF3-229ENST00000601373 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
IRF3-229ENST00000601373 BBOX1O75936 387 aa16.55■□□□□ 0.24
IRF3-229ENST00000601373 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
IRF3-229ENST00000601373 BECN1Q14457 450 aa16.55■□□□□ 0.24
IRF3-229ENST00000601373 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
IRF3-229ENST00000601373 ANO2Q9NQ90 1003 aa16.55■□□□□ 0.24
IRF3-229ENST00000601373 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
IRF3-229ENST00000601373 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
IRF3-229ENST00000601373 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
IRF3-229ENST00000601373 GOLIM4O00461 696 aa16.54■□□□□ 0.24
IRF3-229ENST00000601373 MMP10P09238 476 aa16.54■□□□□ 0.24
IRF3-229ENST00000601373 PDE6BP35913 854 aa16.54■□□□□ 0.24
IRF3-229ENST00000601373 FKBP4Q02790 459 aaKnown RBP eCLIP16.54■□□□□ 0.24
IRF3-229ENST00000601373 TTF1Q15361 905 aaPredicted RBP16.54■□□□□ 0.24
IRF3-229ENST00000601373 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
IRF3-229ENST00000601373 NRXN2Q9P2S2 1712 aa16.53■□□□□ 0.24
IRF3-229ENST00000601373 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 NMIQ13287 307 aaPredicted RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 EDC3Q96F86 508 aaKnown RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
IRF3-229ENST00000601373 PHKA1P46020 1223 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 KCNJ4P48050 445 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 ANAPC15P60006 121 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
IRF3-229ENST00000601373 TAF1P21675 1872 aa16.52■□□□□ 0.23
IRF3-229ENST00000601373 ZBTB22O15209 634 aa16.51■□□□□ 0.23
IRF3-229ENST00000601373 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
IRF3-229ENST00000601373 MCAMP43121 646 aa16.51■□□□□ 0.23
IRF3-229ENST00000601373 ZAP70P43403 619 aa16.51■□□□□ 0.23
IRF3-229ENST00000601373 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■□ 19.7
IRF3-229ENST00000601373 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
IRF3-229ENST00000601373 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
IRF3-229ENST00000601373 COL4A1P02462 1669 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 NPR1P16066 1061 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 SCARF1Q14162 830 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 RABEP1Q15276 862 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 MCMDC2Q4G0Z9 681 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
IRF3-229ENST00000601373 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 XDHP47989 1333 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 SNAP23O00161 211 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 SEMA3EO15041 775 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 HSPA4P34932 840 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 KIF2CQ99661 725 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 IL25Q9H293 177 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
IRF3-229ENST00000601373 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 SRGNP10124 158 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 ATP2B4P23634 1241 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 BCAMP50895 628 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 ZMYM1Q5SVZ6 1142 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 SNX21Q969T3 373 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 MED23Q9ULK4 1368 aa16.48■□□□□ 0.23
IRF3-229ENST00000601373 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
IRF3-229ENST00000601373 CYP2E1P05181 493 aaPredicted RBP16.47■□□□□ 0.23
IRF3-229ENST00000601373 C15orf52Q6ZUT6 534 aaKnown RBP16.47■□□□□ 0.23
IRF3-229ENST00000601373 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
IRF3-229ENST00000601373 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
IRF3-229ENST00000601373 FAM84BQ96KN1 310 aaPredicted RBP16.47■□□□□ 0.23
IRF3-229ENST00000601373 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
IRF3-229ENST00000601373 DENND2AQ9ULE3 1009 aa16.47■□□□□ 0.23
IRF3-229ENST00000601373 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
IRF3-229ENST00000601373 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
IRF3-229ENST00000601373 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
IRF3-229ENST00000601373 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
IRF3-229ENST00000601373 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
IRF3-229ENST00000601373 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms