RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RRAGCQ9HB90 399 aa16.12■□□□□ 0.17
SRRM1-223ENST00000600523 RAD17O75943 681 aa16.11■□□□□ 0.17
SRRM1-223ENST00000600523 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
SRRM1-223ENST00000600523 L3MBTL3Q96JM7 780 aaPredicted RBP16.11■□□□□ 0.17
SRRM1-223ENST00000600523 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
SRRM1-223ENST00000600523 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
SRRM1-223ENST00000600523 AKAP2Q9Y2D5 859 aa16.11■□□□□ 0.17
SRRM1-223ENST00000600523 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 SSH3Q8TE77 659 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 LPIN2Q92539 896 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 NMRK2Q9NPI5 230 aa16.1■□□□□ 0.17
SRRM1-223ENST00000600523 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
SRRM1-223ENST00000600523 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
SRRM1-223ENST00000600523 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
SRRM1-223ENST00000600523 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
SRRM1-223ENST00000600523 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
SRRM1-223ENST00000600523 RPS12P25398 132 aaKnown RBP16.09■□□□□ 0.17
SRRM1-223ENST00000600523 HIBADHP31937 336 aaKnown RBP16.09■□□□□ 0.17
SRRM1-223ENST00000600523 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
SRRM1-223ENST00000600523 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
SRRM1-223ENST00000600523 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
SRRM1-223ENST00000600523 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
SRRM1-223ENST00000600523 YDJCA8MPS7 323 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 H7C1D1 291 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 POLA2Q14181 598 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 GNL3LQ9NVN8 582 aaKnown RBP16.08■□□□□ 0.16
SRRM1-223ENST00000600523 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
SRRM1-223ENST00000600523 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
SRRM1-223ENST00000600523 PSMD14O00487 310 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 TOMM70O94826 608 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 AAMPQ13685 434 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 STRIP1Q5VSL9 837 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 CD209Q9NNX6 404 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 COL4A5P29400 1685 aa16.07■□□□□ 0.16
SRRM1-223ENST00000600523 WDR90Q96KV7 1748 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 SNAP23O00161 211 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
SRRM1-223ENST00000600523 KLRK1P26718 216 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 EPHX2P34913 555 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
SRRM1-223ENST00000600523 GORABQ5T7V8 394 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 TXNRD3Q86VQ6 643 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 DPF2Q92785 391 aa16.06■□□□□ 0.16
SRRM1-223ENST00000600523 IL1R1P14778 569 aa16.05■□□□□ 0.16
SRRM1-223ENST00000600523 GYG1P46976 350 aa16.05■□□□□ 0.16
SRRM1-223ENST00000600523 TFCP2Q12800 502 aa16.05■□□□□ 0.16
SRRM1-223ENST00000600523 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
SRRM1-223ENST00000600523 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
SRRM1-223ENST00000600523 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
SRRM1-223ENST00000600523 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
SRRM1-223ENST00000600523 SCN4AP35499 1836 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 KIF3CO14782 793 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 SASH1O94885 1247 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 FGFR2P21802 821 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 MMP14P50281 582 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 SCNN1DP51172 638 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 GTF2IP78347 998 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 NEUROD6Q96NK8 337 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 TAF1DQ9H5J8 278 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 ADARB2Q9NS39 739 aaKnown RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
SRRM1-223ENST00000600523 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SRRM1-223ENST00000600523 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 MICALL2Q8IY33 904 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
SRRM1-223ENST00000600523 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 KCNQ5Q9NR82 932 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
SRRM1-223ENST00000600523 A0A1B0GUL6 1792 aa16.03■□□□□ 0.16
SRRM1-223ENST00000600523 A0A1B0GUL7 405 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 DACT2Q5SW24 774 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 LDHDQ86WU2 507 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.16
SRRM1-223ENST00000600523 TBC1D22AQ8WUA7 517 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 GPR108Q9NPR9 543 aa16.02■□□□□ 0.16
SRRM1-223ENST00000600523 IRS2Q9Y4H2 1338 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 POTECB2RU33 542 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 RAB11FIP3O75154 756 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 EPS15P42566 896 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 BCAMP50895 628 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 TIMM10P62072 90 aa16.01■□□□□ 0.15
SRRM1-223ENST00000600523 FKBP1AP62942 108 aaKnown RBP16.01■□□□□ 0.15
SRRM1-223ENST00000600523 SEMA3EO15041 775 aa16■□□□□ 0.15
SRRM1-223ENST00000600523 FSTL1Q12841 308 aa16■□□□□ 0.15
SRRM1-223ENST00000600523 CHAF1AQ13111 956 aaPredicted RBP16■□□□□ 0.15
SRRM1-223ENST00000600523 CCDC158Q5M9N0 1113 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms