RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 IGKV5-2P06315 115 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 NEXNQ0ZGT2 675 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 ERCC6LQ2NKX8 1250 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 CCDC129Q6ZRS4 1044 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 CALCOCO1Q9P1Z2 691 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 KIAA1468Q9P260 1216 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 PCDHA7Q9UN72 937 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 SH3TC1Q8TE82 1336 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 FOSBP53539 338 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 SYT10Q6XYQ8 523 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 STOX1Q6ZVD7 989 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 C14orf37Q86TY3 774 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 TIGD1Q96MW7 591 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 XPO4Q9C0E2 1151 aaKnown RBP21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 RTEL1Q9NZ71 1219 aa21.71■■□□□ 1.07
ARHGEF1-221ENST00000600387 APOBRQ0VD83 1088 aa21.7■■□□□ 1.06
ARHGEF1-221ENST00000600387 ARMCX5Q6P1M9 558 aa21.7■■□□□ 1.06
ARHGEF1-221ENST00000600387 TMC6Q7Z403 805 aa21.7■■□□□ 1.06
ARHGEF1-221ENST00000600387 RIC3Q7Z5B4 369 aa21.7■■□□□ 1.06
ARHGEF1-221ENST00000600387 NOL10Q9BSC4 688 aaKnown RBP21.7■■□□□ 1.06
ARHGEF1-221ENST00000600387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.7■■□□□ 1.068e-7■■■□□ 15
ARHGEF1-221ENST00000600387 SMC2O95347 1197 aa21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 EXOSC10Q01780 885 aaKnown RBP21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 AIMP1Q12904 312 aaKnown RBP21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 HAUS7Q99871 368 aa21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 ILDR1Q86SU0 546 aaPredicted RBP21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 SEC62Q99442 399 aaKnown RBP21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 IFNKQ9P0W0 207 aa21.69■■□□□ 1.06
ARHGEF1-221ENST00000600387 PRAMEF22A3QJZ6 481 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 NEURL1BA8MQ27 555 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 ZNF274Q96GC6 653 aaPredicted RBP21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 DNAJC2Q99543 621 aaKnown RBP21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 FHOD1Q9Y613 1164 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 NPHP1O15259 732 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 CLCN6P51797 869 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 GCKRQ14397 625 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 ERCC4Q92889 916 aaPredicted RBP21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 ARGLU1Q9NWB6 273 aaPredicted RBP21.68■■□□□ 1.06
ARHGEF1-221ENST00000600387 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 PHLPP2Q6ZVD8 1323 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 CCT2P78371 535 aaKnown RBP21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 DPCR1Q3MIW9 517 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 FBXW7Q969H0 707 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 CARMIL3Q8ND23 1372 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 PXDNQ92626 1479 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 A0A1B0GVL5 298 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 TFCP2Q12800 502 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 PDIA6Q15084 440 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 TICAM2Q86XR7 235 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 KCNG4Q8TDN1 519 aa21.67■■□□□ 1.06
ARHGEF1-221ENST00000600387 NDUFA8P51970 172 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 NLRP12P59046 1061 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 EPHA10Q5JZY3 1008 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 KBTBD3Q8NAB2 608 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 SRRTQ9BXP5 876 aaKnown RBP21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 ST7Q9NRC1 585 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 HELLSQ9NRZ9 838 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 ETF1P62495 437 aaKnown RBP21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 ARHGAP29Q52LW3 1261 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 LINC00301Q8NCQ3 95 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
ARHGEF1-221ENST00000600387 YEATS4O95619 227 aa21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 PNMA6AP0CW24 399 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 PDIA3P30101 505 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 CYP2C19P33261 490 aa21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 STK38Q15208 465 aa21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 SF3A1Q15459 793 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 HOMER1Q86YM7 354 aa21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 KCNH5Q8NCM2 988 aa21.65■■□□□ 1.06
ARHGEF1-221ENST00000600387 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.06
ARHGEF1-221ENST00000600387 GUCY1B3Q02153 619 aa21.64■■□□□ 1.06
ARHGEF1-221ENST00000600387 TMEM51Q9NW97 253 aa21.64■■□□□ 1.06
ARHGEF1-221ENST00000600387 NDUFB9Q9Y6M9 179 aa21.64■■□□□ 1.06
ARHGEF1-221ENST00000600387 ERICH4A6NGS2 130 aa21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 UBXN4Q92575 508 aa21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 METTL22Q9BUU2 404 aaPredicted RBP21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 NCOA5Q9HCD5 579 aaKnown RBP21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 POLR3EQ9NVU0 708 aa21.64■■□□□ 1.05
ARHGEF1-221ENST00000600387 IKBKBO14920 756 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 TPM1P09493 284 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 TMCO3Q6UWJ1 677 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 DDX46Q7L014 1031 aaKnown RBP21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 DBNDD2Q9BQY9 259 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 CHGBP05060 677 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 LRRN4CLQ8ND94 238 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 BBXQ8WY36 941 aaPredicted RBP21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 NEDD4P46934 1319 aa21.63■■□□□ 1.05
ARHGEF1-221ENST00000600387 E7EWF7 191 aa21.62■■□□□ 1.05
ARHGEF1-221ENST00000600387 ZRANB2O95218 330 aaKnown RBP eCLIP21.62■■□□□ 1.05
ARHGEF1-221ENST00000600387 NCAPHQ15003 741 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms